| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2588 |
|---|
| Symbol | |
|---|
| ID | 4787025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 2761499 |
|---|
| End bp | 2762743 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640091159 |
|---|
| Product | pyrroloquinoline quinone biosynthesis protein PqqE |
|---|
| Protein accession | YP_001021777 |
|---|
| Protein GI | 124267773 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0973479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACG CCGCCGCCCC CGCCGCTTCG CCCGCCACCC CGCAGCCCCC CGGCGCGCCG
ATGTGGCTGC TCGCGGAGCT CACCTACAAG TGCCCGCTGC ACTGCGTGTT CTGCTCCAAC
CCCACGAACT ACGCCGACCA CCTGGGCGAG ATCGGCACCG AGGACTGGAA GCGCGTGTTC
CGCGAGGCGC GGCAGATGGG CGCGGTGCAG CTCGGCTTCT CGGGCGGCGA GCCGCTGCTG
CGCGACGACC TGGAAGAGCT GGTGGCCGAA GCGCGCCAGC TCGGCTACTA CACCAACCTC
ATCACCTCGG GCATCGGCCT CACCGAAAAG CGCGCCCGCG CGCTGAAGGA CGCCGGGCTC
GACCACATCC AGCTCAGCTT CCAGGACTCC ACCAAGGAGC TGAACGACTT CCTGTCGTCC
ACCCGCACCT TCGACCACAA GAACAAGGTG GCCGCGATCA TCAAGTCGCT CGGCTACCCG
ATGGTGCTGA ACTGCGTGAT GCACCGCTAC AACCTGCCGC ACGTGGGCCG CATCATAGAG
ATGGCCGAGG CCATGGGCGC CGACTACCTG GAGCTGGCCA ACACCCAGTA CTACGGCTGG
GCCTGGCTCA ACCGCGCGGC GCTGATGCCC ACGCCCGACG AACTGCGCGC GGCCGAGGCC
ATCGTCGACA GCCACCGCGA GCGGCTGGCC GGCCGCACCA AGATCCTGTG GGTCTCGCCC
GACTACGTGG ACGCCAAGCC CAAGCCCTGC ATGGCCGGCT GGGGCGCGGT GTTCATGGTC
ATCGCGCCCG ACGGCACAGC CCTGCCCTGC CACAGCGCGC GCATGCTGCC GGGCTTCGAC
TTTCCCAAGG TCACCGAGCA CAGCATCGCC GGCATCTGGC GCGACAGCGA CGCCTTCAAC
CGCTACCGCG GCACGGCGTG GATGAGCGAC ACCTGCCTGA GCTGCGACCA GCACCCGGTC
GACCACGGCG GCTGCCGCTG CCAGGCCTTC CTGGTCTCCG GCGACGCGGC GGCCACCGAC
CCGGTCTGCC CCAAGAGCCC CGACCGCCCG CTGATCGACG CCGCGCTGCA GGCCGCCGTC
GAGCAGGCCG AGGCCGCGCC CGCGACCCAG CCGCTGCGCT TCGTGCCCGG TGCGGCGCGC
AGCGGCAACC TCTGGTACCG CACCGACGCG AACTCGCGCA CGCTGTCCGA CGACGGGCAC
GGCCCGCAGC ACGACACCGC GCCCGCCGCC GCCGAGACGC GGTGA
|
|---|
| Protein sequence | MSHAAAPAAS PATPQPPGAP MWLLAELTYK CPLHCVFCSN PTNYADHLGE IGTEDWKRVF
REARQMGAVQ LGFSGGEPLL RDDLEELVAE ARQLGYYTNL ITSGIGLTEK RARALKDAGL
DHIQLSFQDS TKELNDFLSS TRTFDHKNKV AAIIKSLGYP MVLNCVMHRY NLPHVGRIIE
MAEAMGADYL ELANTQYYGW AWLNRAALMP TPDELRAAEA IVDSHRERLA GRTKILWVSP
DYVDAKPKPC MAGWGAVFMV IAPDGTALPC HSARMLPGFD FPKVTEHSIA GIWRDSDAFN
RYRGTAWMSD TCLSCDQHPV DHGGCRCQAF LVSGDAAATD PVCPKSPDRP LIDAALQAAV
EQAEAAPATQ PLRFVPGAAR SGNLWYRTDA NSRTLSDDGH GPQHDTAPAA AETR
|
|---|
| |