| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2583 |
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| Symbol | |
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| ID | 4787018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 2756078 |
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| End bp | 2758207 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640091152 |
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| Product | sigma-54 activated regulatory protein |
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| Protein accession | YP_001021771 |
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| Protein GI | 124267767 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCC CCAGCGTGCA CCCCACCCCG AGCACGGGCC GCCGCCGCCG CGAAGAGGCG
GCCCAGCGGC CGATCGCCAG CGCCCTGCCC CTCGACGGCG AGCATGTGCT GTCGATCAAC
GAATCCCACG AGCGCTGTGC CGCGCTGGGC CTGAGCCGCA TCGGCGCGCC CGACTACACG
CCGCTCGGCC GCGCCGACTT CACCATCACC CGCGAGCGCA ACCGCCGCCT GTTCGCCCAC
GCGGCGCCGG TGATGGAACT GCTGTTCGAC CAGATCGTGA AAACCCAGAG CATGGTCGTG
CTGACCGACG CGCAGGGCAC CATCCTCCAC TCCATCGGCG ACGAAGACTT CCTCGAGAAG
GCCGGCAAGG TGGCGCTGGC GCCCGGCGTC AACTGGGCCG AGTGCACCAA GGGCACCAAC
GGCATGGGCA CCGCGCTGGT CGACGAGACC GCGGTGCTGG TGCATGCCGA CGAGCACTTC
ATGCACGCCA ACCACTTCCT GACCTGCCAG GCCGCGCCCA TCCTCGACCC GCGCGGCAAC
ATCCTGGGCG TGCTCGACGT GTCGGGCGAC CGGCGCGGCT ACCACCAGCA CACCATGGGG
CTGGTCAAGA TGTCGGCGCG CATGATCGAG AACCACTGGC TGAACGACGA CTTCAGCGAC
GCGCTCCGTC TGCACATCCA TCCGCGCATG GAGTTCATCG GCACGCTGCT CGAAGGAATC
CTCGCGATCG ACCGCGACGG CCGGCTGCTC GGCGCCAACC GCAGTGCGCT CGACCTGCTG
GGCATGAGCG GCGCCGCGCT GCGCATGCAC ACCGTGGCCA GCCTGCTGGG CACGCCGCTC
GGTGCCATCG TCGACCGCGG CCGCGCGCTG ATGGGCGCCC CGATGCGCAT GGCGCTGCCC
AATGGCCAGA CCGTGCATGT GCAGGCCCGC TGCAACTGGC CGCTGTGGCC CGGCCAGTGG
ACCGGCACGG GCGGCGGCCT GCGCGACGCG GCGGCCGACG GCACCCCTGC CATGCCGGCG
ACCGAGGAAA TCGGCCCCAC GTCGCCTGCC GCGACCGCGC GCGACGCCGC AACCCGCAAC
CCCCGGCCGG CCCCGGCAGC CGACGGCGGT GCGCCGGCCG AAACTGCCCC GGAACCCGAA
GTCACCTTCG CGCGCCTGCA GACCGGCGAC CTGCAGATCG AGGCACTGAT CTCCAAGCTG
CGCCGGGTGC TCGACCGCGA CATCCCGGTG CTGATCCTCG GCGAAGCCGG CAGCGGCAAG
GAGATGCTGG CGCGCGCCAT CCACCGCGAA TCGCGGCGGG CGCACCGGCC CTTCATCTCG
GTCCAGTGCG CCTCCACGCC CGAGGCGCAG CTCGAGGCCG AGCTGCTGGG CTACGCCGAG
GGCGTGTTCC CGGGCGCACG GCGCAAGGGC GCGGTCGGCA AGCTGGTGCA GGCCTCCGGC
GGCACGCTCT TCCTCGACGA GATCGGCGGT CTGCCGCTCG GGCTGCAGGC ACGCCTGCTG
CGTGTGCTGC AGGAGCGCCA GGTCACGCCG CTGGGCGCGG TGCAGCCGCA GGAGGTTGAC
CTGGCCCTCA TCGGCGCCAC CGACCGCAAC CCGCGCGAGC TGATCGACAC CCACCGCATC
CGCGAGGACC TCTACTACCG GCTCAACGGG CTGGCGGTGA AGCTGCCGCC GCTGCGCGAG
CGCTCCGACC TGATGGCCCT GGTGCGCCGG CTGCTTGCCG ACGAGGCGCC CGGCGCGCCG
CTCATGCTGG CGCCGGACGT CGAGGCCCTG CTGCAGCGCT ACGACTGGCC CGGCAACCTG
CGGCAGCTGG CCAACGTGCT GCACACCGCC GCGGTGATGG CAGCCGGCGA GCCGGTGATC
ACCCGCGAGC ACCTGTCGGA CGACTTCCTC GAGGAAGCCC AGCTGCGGGC CGCCCCCGGC
GCCGCGGCGC CCGGCGGGCC CGCGCCGGGC GTGGTGCGCG CGATGGCGAG CGGCATCGAC
AGCGGCGGCA AGACCCTCGA GGAACTGGAG CGCGAGATGA TCCGCCACGC GGTGGACGCC
GCCGACGGCA ACATCTCGGT CGCCTCCAAG CGCCTGGGCA TCAGCCGCAA CACCATCTAC
CGCAAGCTGC GCTGGCGCGA GCCGGAATGA
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| Protein sequence | MSIPSVHPTP STGRRRREEA AQRPIASALP LDGEHVLSIN ESHERCAALG LSRIGAPDYT
PLGRADFTIT RERNRRLFAH AAPVMELLFD QIVKTQSMVV LTDAQGTILH SIGDEDFLEK
AGKVALAPGV NWAECTKGTN GMGTALVDET AVLVHADEHF MHANHFLTCQ AAPILDPRGN
ILGVLDVSGD RRGYHQHTMG LVKMSARMIE NHWLNDDFSD ALRLHIHPRM EFIGTLLEGI
LAIDRDGRLL GANRSALDLL GMSGAALRMH TVASLLGTPL GAIVDRGRAL MGAPMRMALP
NGQTVHVQAR CNWPLWPGQW TGTGGGLRDA AADGTPAMPA TEEIGPTSPA ATARDAATRN
PRPAPAADGG APAETAPEPE VTFARLQTGD LQIEALISKL RRVLDRDIPV LILGEAGSGK
EMLARAIHRE SRRAHRPFIS VQCASTPEAQ LEAELLGYAE GVFPGARRKG AVGKLVQASG
GTLFLDEIGG LPLGLQARLL RVLQERQVTP LGAVQPQEVD LALIGATDRN PRELIDTHRI
REDLYYRLNG LAVKLPPLRE RSDLMALVRR LLADEAPGAP LMLAPDVEAL LQRYDWPGNL
RQLANVLHTA AVMAAGEPVI TREHLSDDFL EEAQLRAAPG AAAPGGPAPG VVRAMASGID
SGGKTLEELE REMIRHAVDA ADGNISVASK RLGISRNTIY RKLRWREPE
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