| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2461 |
|---|
| Symbol | |
|---|
| ID | 4785658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2623624 |
|---|
| End bp | 2625948 |
|---|
| Gene Length | 2325 bp |
|---|
| Protein Length | 774 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640091031 |
|---|
| Product | ATP-dependent Clp protease ATP-binding subunit ClpA |
|---|
| Protein accession | YP_001021651 |
|---|
| Protein GI | 124267647 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.597625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.840224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTATG GAGGCCGCAT GATTGCGCAA GAACTGGAAG TCAGCCTGCA CATGGCGTTC
GTCGAAGCGC GTCAGCAGCG CCACGAATTC ATCACGGTCG AGCATCTGCT GCTCGCGCTG
CTCGACAACC CGTCCGCCGC CGAAGTGCTG CGCGCCTGCT CGGCCAGCCT CGATGACCTG
CGCAAGAGCC TGACGCAGTT CATCAAGGAG AACACGCCCA CGGTCGGCGG CACCGACGAG
GTCGACACCC AACCCACGCT GGGATTCCAG CGCGTGATCC AGCGCGCGAT CATGCACGTG
CAGTCCACCG GGTCCGGCAA GAAGGAAGTG ACGGGCGCCA ACGTGCTGGT GGCGATCTTC
GGCGAGAAGG ATTCGCACGC GGTGTACTAC CTTCACCAGC AGGGCGTGAC GCGGCTGGAC
GTGGTGAACT TCATCGCCCA CGGCATCAAG AAGTCCGAGC CGCCCGAGCC TTCCAAGGGC
GCCGAGGGCG GCAGCGGCGA AGGCGAGAAG GAAGAGGCCG GCGAAGGCAA GGGCTCGCCG
CTGGACCAGT TCACCCAGAA CCTCAACCAG CTCGCCCGTG ACGGCAAGAT CGATCCGCTG
ATCGGCCGCG AGCACGAGGT CGAGCGGGTG ATCCAGGTGC TGTGCCGCCG CCGCAAGAAC
AACCCGCTGC TGGTGGGCGA GGCCGGGGTC GGCAAGACCG CGATCGCCGA GGGCCTGGCG
TGGCGCATCA CGCAGAACGA CGTGCCCGAG ATCCTGGCCG ACGCGACCGT CTACTCGCTC
GACATGGGCG CGCTGCTGGC CGGTACCAAG TACCGCGGCG ATTTCGAGCA GCGCCTGAAG
GGCGTGTTGA AGGCCCTGAA GGAGCAGCCC CATGCCGTGC TGTTCATCGA CGAGATCCAC
ACGCTGATCG GCGCCGGCGC CGCATCGGGC GGCACGCTCG ACGCCAGCAA CCTGCTGAAG
CCGGCGCTCG GCTCCGGGCA GCTCAAGTGC ATCGGCGCAA CCACGTTCAC CGAGTACCGC
GGCATCTTCG AGAAGGATGC GGCACTGTCG CGGCGCTTCC AGAAGGTCGA CGTGGTCGAG
CCTTCGGTCG AGCAGACCAT CGAGATCCTG AAGGGGCTGA AGTCGCGCTT CGAGGAGCAC
CACAGCGTGA AGTACGCGCT GGGCGCGCTG CAGGCCGCAG CCGAGCTGTC GGCCAAGTTC
ATCAACGACC GCCACCTGCC CGACAAGGCG ATCGACGTGA TCGACGAGGC CGGTGCCGCC
CAGCGCATCC TGCCCAAGAG CAAGCAGAAG AAGACGATCA ACCGCGCGGA GGTCGAGGAG
ATCGTCGCCA AGATCGCGCG CATCCCGCCG CAGAGCGTCA GCAACGACGA CCGCGGCAAG
CTGAAGAACC TGGACCGCGA CCTGAAGAGC GTGGTGTTCG GTCAGGACCC GGCGCTCGAC
GCGCTGGCGT CGGCCATCAA GATGGCGCGC TCGGGCCTGG GCAAGCCGGA CAAGCCGATC
GGCTCCTTCC TGTTCAGCGG CCCCACCGGC GTCGGCAAGA CCGAGGCGGC CAAGCAGCTG
GCCTTCATCC TCGGCATCGA GCTGGTGCGC TTCGACATGT CCGAGTACAT GGAGCGCCAC
ACGGTCAGCC GCCTGATCGG CGCGCCGCCG GGCTACGTGG GCTTCGACCA GGGCGGGCTG
CTGACCGAGG CGGTCACCAA GAAGCCGCAC TGCGTGCTGC TGCTCGACGA GATCGAGAAG
GCCCACCCCG ATGTCTTCAA CGTGCTGCTG CAGGTCATGG ACCACGGCAC GCTGACCGAC
AACAACGGGC GCAAGGCCGA TTTCCGCAAC GTGATCATCA TCATGACCAC GAACGCCGGC
GCGGAGACGA TGAACAAGTC GACCATCGGC TTCACGAATG CCCGCGAATC GGGCGACGAG
ATGGCCGACA TCAAGCGCCT GTTCACGCCG GAGTTCCGCA ACCGGCTCGA CGCGATCGTC
AGCTTCCGCG CGCTCGACGA GGAGATCATC CTGCGGGTGG TCGACAAGTT CCTGCTGCAG
CTCGAGAGCC AGCTGGCCGA GAAGAAGGTC GACGTGACTT TCTCCGACGC CCTGCGCAAG
CACCTGGCGA AGAAGGGCTT CGATCCGCTG ATGGGGGCGC GGCCGATGCA GCGGCTGATC
CAAGACACGA TCCGCCGCGC GCTGGCCGAC GAACTGCTGT TCGGCCGCCT GGTCGATGGC
GGGCGCCTGT CGGTCGACAT CGACGCCGAA GGCCAGCCGG TGCTCGACAT CACGCCGTGG
AAGAAGAGCG ACAAGCCGAA ATCGGAGCCG GCCACGGCCG ACTGA
|
|---|
| Protein sequence | MHYGGRMIAQ ELEVSLHMAF VEARQQRHEF ITVEHLLLAL LDNPSAAEVL RACSASLDDL
RKSLTQFIKE NTPTVGGTDE VDTQPTLGFQ RVIQRAIMHV QSTGSGKKEV TGANVLVAIF
GEKDSHAVYY LHQQGVTRLD VVNFIAHGIK KSEPPEPSKG AEGGSGEGEK EEAGEGKGSP
LDQFTQNLNQ LARDGKIDPL IGREHEVERV IQVLCRRRKN NPLLVGEAGV GKTAIAEGLA
WRITQNDVPE ILADATVYSL DMGALLAGTK YRGDFEQRLK GVLKALKEQP HAVLFIDEIH
TLIGAGAASG GTLDASNLLK PALGSGQLKC IGATTFTEYR GIFEKDAALS RRFQKVDVVE
PSVEQTIEIL KGLKSRFEEH HSVKYALGAL QAAAELSAKF INDRHLPDKA IDVIDEAGAA
QRILPKSKQK KTINRAEVEE IVAKIARIPP QSVSNDDRGK LKNLDRDLKS VVFGQDPALD
ALASAIKMAR SGLGKPDKPI GSFLFSGPTG VGKTEAAKQL AFILGIELVR FDMSEYMERH
TVSRLIGAPP GYVGFDQGGL LTEAVTKKPH CVLLLDEIEK AHPDVFNVLL QVMDHGTLTD
NNGRKADFRN VIIIMTTNAG AETMNKSTIG FTNARESGDE MADIKRLFTP EFRNRLDAIV
SFRALDEEII LRVVDKFLLQ LESQLAEKKV DVTFSDALRK HLAKKGFDPL MGARPMQRLI
QDTIRRALAD ELLFGRLVDG GRLSVDIDAE GQPVLDITPW KKSDKPKSEP ATAD
|
|---|
| |