Gene Mpe_A2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A2396 
Symbol 
ID4784292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp2561132 
End bp2561626 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content65% 
IMG OID640090966 
ProductDNA repair protein 
Protein accessionYP_001021586 
Protein GI124267582 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.139448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTTG TCATCGCCGA CTCCCGCCCG GAGTCGCTCA CCCTGATCGC CGCCCAGCAC 
GAAGACTGGA TCATCCAGCA GGCCATCACC CTGCTGGAGA ACCGCGTGTT CAAGGCCGGT
CCGGCGCTGG GCAGTCCCGC CGCCGTGCGC GACTACCTGC GCCTGAAACT GGTCGCGGAG
CCGAACGAAA TCTTCGCCGT CGTGTTTCTC GACAACCAGC ACCAGGTGCT CGCCTTCGAG
CCGCTGTTCA AGGGCACGGT CGACCAGACT TCTGTGTATC CGAGGGTGGT GGTCCAGCGT
GCGCTGGCGC TCAACGCTTC GGCGCTGATC CTGGCGCATC AGCACCCCTC TGGGAACACC
GAGCCCTCGG CCGCTGATCG TGCGATCACC GAGCGGCTGA AGAGCGCCCT GGCCACCGTC
GATGTCCGGG TGCTGGATCA CTTCATCGTC GGCAAGGGCA GCCCGTACTC GTTCGCCGAA
GCCGGCTTGT TGTAG
 
Protein sequence
MSLVIADSRP ESLTLIAAQH EDWIIQQAIT LLENRVFKAG PALGSPAAVR DYLRLKLVAE 
PNEIFAVVFL DNQHQVLAFE PLFKGTVDQT SVYPRVVVQR ALALNASALI LAHQHPSGNT
EPSAADRAIT ERLKSALATV DVRVLDHFIV GKGSPYSFAE AGLL