| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2374 |
|---|
| Symbol | |
|---|
| ID | 4784389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 2540759 |
|---|
| End bp | 2541628 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640090944 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001021564 |
|---|
| Protein GI | 124267560 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2856] Predicted Zn peptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.126111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACG GCGGCTGGAC GCCCCAGCGT GCTGCGAATC GCCTCGTGAA GGTGGTCGAA
GCTGTCAGCA TGGCGCACGG CATTGATCGG TTTCCGGTGG ACGTGCCTCA GTTGGCGCTT
GAGTCCGCTC GCATATTCAA CTGGTCAGAT CCCATCACAA AGGTCCAAGC TGCGGCGATC
AAAGGTTTTG ACGGAGCATT GTTTCCCGGG GATGGCCGCA AGGAGTGGCT GCTCCTCTAC
AACAACGCGG TGACATCTCC GGGACGTGTG CGCTTCACGC AAGCGCACGA ACTTGGGCAC
TACATTCTGC ACCGGATGCA AAGGGAGTCC TTCCAGTGCA GTGATGCCGA CATGCTGAAC
TGGTCCCAGG ACGATCGCGA CATCGAGGCT CAGGCGGATC TGTTTGCTTC GTACCTGCTG
ATGCCGCTGG ACGACTACCG CAAGCAGGTC ACCACGAACG TCGACATGGA CATCCTCGGC
GCATGCGCGG AGCGCTACGG TGTGTCGCTG ACGGCGGCGA TCTTGAAGTG GTTGCAGTAC
ACCGATGAGA AGGCCGTTCT AGTGATGTCC AACGATGGCT TCATCAATTG GGCTTGGTCG
AGCGAACCCG CGGCCCGAGC TGGCGCGTTC TTCCGCACCC GTGGCAACGT CATTCCTCTG
CCAGAACACT CCCTCGCGGC AAATCAGGAA GTGCTGCATG ATCGACAAGG CACCAAGATT
TCCGCGGCCG TTTGGTTCCC ACACGCCGAT CCGAGTATTC CGCTGCGTGA GATGAAGATA
CACGCAGCAC AGTACGACGC TACGCTGAGC CTTTTGTGCT TACCGCGATC AGCCGAAGCT
TGGCCGCCAC GTGACCGTGA CGAAGAGTAG
|
|---|
| Protein sequence | MTDGGWTPQR AANRLVKVVE AVSMAHGIDR FPVDVPQLAL ESARIFNWSD PITKVQAAAI
KGFDGALFPG DGRKEWLLLY NNAVTSPGRV RFTQAHELGH YILHRMQRES FQCSDADMLN
WSQDDRDIEA QADLFASYLL MPLDDYRKQV TTNVDMDILG ACAERYGVSL TAAILKWLQY
TDEKAVLVMS NDGFINWAWS SEPAARAGAF FRTRGNVIPL PEHSLAANQE VLHDRQGTKI
SAAVWFPHAD PSIPLREMKI HAAQYDATLS LLCLPRSAEA WPPRDRDEE
|
|---|
| |