Gene Mpe_A2356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A2356 
SymbolczcC 
ID4784576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp2523169 
End bp2524434 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content72% 
IMG OID640090925 
ProductRND OM export protein 
Protein accessionYP_001021547 
Protein GI124267543 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTCC TATTCGCGGC CGCGTGGCTG CTGTCCAGCG CGGTGATCGC GCCGGCCAAC 
GCCACCGAGC GAATGACCTT GGACGAGGCG ATTGCGCGTG TTGCCGCAAC GCACCCTGAC
CTGCGCTGGG TCGACGCCCG CGCCAAGGTG CTTGAGGCCG AACGTGAGCG GTCGGCGCAA
CGCCCGCCCT GGGTGCTTGG CGCCGAGATC GAGAATGCGT TCGGCACCGG CGAAACCCGC
GGCATGGACG GCGCCGAGTT GACGCTGAGC CTGGCCTCCG TCCTGGAGCG CGGCGGCAAG
CTCGATGCGC GGCGCGCCTT GGCGCAGAGC CGCATCGACG CCCTGGCCGT GCAACGCGAG
ACGCGCCGCC TGGACCTGCT GGCGGAGACG GCACGGCGTT ACCTGGCCGT GGTGGCCGCG
GATCGTACCC GCAGCCTCGC CGCGCGGGAT GTCGAGCAGC GCCAGCGCAC CGTGGCCGCC
GCACGCCACC GCCTGCAGGC CGGTGCGTCG CCCGAATCGG TGCTGTTGAC CGCGCAAGCG
GCACTCGCCC GGGCCGAACT CGCCCGCGAC CGCGCCGCGC AACAGTTCGC GGCCGCACGG
CAGCACCTGG CCGCGCTGTG GGGCGAACGC GCTCCCGCGT TCGAGGCGCT GGCCGGCGAT
CCGCTGGCGC TGCCGGCCAT CGCGCCGGTC GAGGCTCTGG TGAGCGAGCT GGAGCGCACG
CCGGAGCTGG CCCAGTTCGC CGACGAACGA CGCGTCGGCG AGGCGCGCCT GCGGTTGGCG
CAGTCCGCCG CGGCACGCGA TCTGGACTGG CAGGTCGGCA TCCGCCGCCT GCAGGACAGC
GGCGAAACCG CCTTGGTCGC CGGCGTTTCG CTGCCGTTGG GCAGCCGCGC ACGTGCCGAG
CCGGAGATCC GCGCGGCACA GGCCGAACTG GAGGCGCTGT CGATCGAACG CGAAGCCAAG
GGGCTGTCGT TGTACTCGAC GCTGGTGGAG GCCCACGGCC GCTACACCGT GGCGCAAGCC
GAAGTCGTCC GCCTGCAGCG CGACGTGTTG CCTAGGCTTG CACGCGCCGA ACAGGCGGCC
GAGCGCGCTT ACCGCGCCGG CGCCATCAGT TACCTCGAAT GGGCGCAACT GCAGTCCGAG
CAGACCGCCG CCCGGCAACA GCAGCTCGAC GTTGCGCTCG ATGCGCAACG CGCCCTCATT
GAAATCCAGC GACTGACCGG TCAGCCCTTC GTGCAGCCGG CCGGTGTTTC CGGAGTAACC
CCATGA
 
Protein sequence
MRFLFAAAWL LSSAVIAPAN ATERMTLDEA IARVAATHPD LRWVDARAKV LEAERERSAQ 
RPPWVLGAEI ENAFGTGETR GMDGAELTLS LASVLERGGK LDARRALAQS RIDALAVQRE
TRRLDLLAET ARRYLAVVAA DRTRSLAARD VEQRQRTVAA ARHRLQAGAS PESVLLTAQA
ALARAELARD RAAQQFAAAR QHLAALWGER APAFEALAGD PLALPAIAPV EALVSELERT
PELAQFADER RVGEARLRLA QSAAARDLDW QVGIRRLQDS GETALVAGVS LPLGSRARAE
PEIRAAQAEL EALSIEREAK GLSLYSTLVE AHGRYTVAQA EVVRLQRDVL PRLARAEQAA
ERAYRAGAIS YLEWAQLQSE QTAARQQQLD VALDAQRALI EIQRLTGQPF VQPAGVSGVT
P