| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2328 |
|---|
| Symbol | |
|---|
| ID | 4783845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2498408 |
|---|
| End bp | 2499316 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640090897 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001021519 |
|---|
| Protein GI | 124267515 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.418813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGATTTCA GATTGCTGCG TTACTTCGTC GCAGTTGCGG AAGAACTGCA TCTGGCCCGT
GCAGCCGAGC GTCTGGGCAT CGAGCAGTCG CCTGTGTCGC GTGCGATGCG CGACCTGGAA
AGCCAGCTTG GCGTGCAGTT GTTCGACCGC AGCACACGCC TGACGCGGCT GACCTGGGCC
GGCCAGGTGT TCCTCGGCGA ATGCCGGCGC GTGATGGCCA CCGTGGAGCA GGCAGTCAAG
AGCGCCAAGG CGGCGGCACA GGGCTACCAG GGCCATCTGC GCATCGCCAT CTGCGACAGC
CTGGCGCAGC CCCGCATCGC CACCCTGCTG GCACGCAGCC GTGAGGAGGA GCCCGAGCTG
GAGATTCGCG TCTTCGAGCT GCCGTTCGCG CAGCAGCTCA AGATGCTGCA CGATGATCTG
CTGGACATCG GCTTTGCGTT GTCAAACGCG GTGCATGATG GCCTCGTCGC CGAGCCGGTG
TGGACCGACC CGCTGTCGGT GATCGTGCCC GCACGCCATC CCTTGCTGGC ACACGTGCAG
GTGCCGCTGC CCGAAGCCTT GAAGTTTCCG CTGGTTCTGT GCCATCCCGA ATCGGGATCG
GGCTGCCGCC ATCAGATTCA AGCGCTGCTG CAGGACGCAG GCACGCCGCT CAAGCTGGTC
GATGAAGTGA CCAGCCTCGG CGTGATGTTG ACCCTGGTCG GCGCCGGCTA CGGCATCGGC
TTCGCCATCG CCTCGCAGGT GCAGACGCTA CAGCGCCCGG ACATCTCCAT TCGTCCCCTG
GCCGGCACCC CACCGATGCT CTCTACCTAC CTGCTGCGCC GCCGGGGCGA ACCCTCGGAG
CCCATGAGGC GGTTCATCGA GCGGGTGAAA GACGGGGCCG CGCCGGTCGA TGATGAGCCA
GTCCTTTGA
|
|---|
| Protein sequence | MDFRLLRYFV AVAEELHLAR AAERLGIEQS PVSRAMRDLE SQLGVQLFDR STRLTRLTWA
GQVFLGECRR VMATVEQAVK SAKAAAQGYQ GHLRIAICDS LAQPRIATLL ARSREEEPEL
EIRVFELPFA QQLKMLHDDL LDIGFALSNA VHDGLVAEPV WTDPLSVIVP ARHPLLAHVQ
VPLPEALKFP LVLCHPESGS GCRHQIQALL QDAGTPLKLV DEVTSLGVML TLVGAGYGIG
FAIASQVQTL QRPDISIRPL AGTPPMLSTY LLRRRGEPSE PMRRFIERVK DGAAPVDDEP
VL
|
|---|
| |