Gene Mpe_A2318 details

Gene Information

• Locus tag: Mpe_A2318
• ID: 4783835
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylibium petroleiphilum PM1
• Kingdom: Bacteria
• Replicon accession: NC_008825
• Strand: +
• Start bp: 2486190
• End bp: 2486573
• Gene Length: 384 bp
• Protein Length: 127 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640090887
• Product: assimilatory nitrite reductase (NAD(P)H) small subunit
• Protein accession: YP_001021509
• Protein GI: 124267505
• COG category: [P] Inorganic ion transport and metabolism; [R] General function prediction only
• COG ID: [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
• TIGRFAM ID: [TIGR02378] nitrite reductase [NAD(P)H], small subunit

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.125191
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATGAGTG ACTGGAAGAC AATCTGCCGT GTCGAAGACA TCCCGGTGCT GGGCGCGCGC 
CGCGTGCTGC GGGCCAACGC CGTGGCCGTG GCGGTGTTCC GCAACAGCGA GGACAAGGTG 
TTCGCGCTGC TCGACCGCTG CCCGCACAAG GGCGGCCCGC TGAGCCAGGG CATCGTGTTC 
GGCGAGAGCG TGGCCTGCCC GCTGCACAAC TGGACCATCG GTCTGGCCGA CGGCTGCGCC 
AAGGCGCCCG ACGAGGGCTG CACGCCGACC TTTGCCTGCA AGGTCGAGGG CGGCGAGGTC 
TTCCTCGATG CCGCGGAACT GGCCGGCAAG GCACTCGACG CCGTCGCCCC GGTCGCGGGC 
CCCTGCAGCA AGGCGACGGC CTGA 

 

Protein sequence

MMSDWKTICR VEDIPVLGAR RVLRANAVAV AVFRNSEDKV FALLDRCPHK GGPLSQGIVF 
GESVACPLHN WTIGLADGCA KAPDEGCTPT FACKVEGGEV FLDAAELAGK ALDAVAPVAG 
PCSKATA