Gene Mpe_A2292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A2292 
SymbolfepA 
ID4785777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp2454550 
End bp2457357 
Gene Length2808 bp 
Protein Length935 aa 
Translation table11 
GC content69% 
IMG OID640090860 
ProductOM receptor TonB 
Protein accessionYP_001021483 
Protein GI124267479 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCC GATCCCGAGC CCGAAAGCAC CGCCTGACGC CACTGAAGCG CGCGGTGCTT 
TCGTTGGCGA CACTGGCCTC GCCGTTGTCG ACGCTGGCCC AGCAGGCGCC CGCGGCCGCG
GCCTCGGCGC CCGAAGCCGC CCCGTCCGAT GCCGCCGTGC GGCTCAACCC CGTGCTGGTA
CCGGGCAAGC GCGCCACCGA CGTCGGGCCG ATGCCGGGCC TGGCGGTCAC GAAGGACCAG
ATCCCCGCGA ACATCCAGAG CGCGACCAAG GAGCAGATCA AGGAATCGCG GGCGCTGAAC
ATCGGCGACT ACATGAACAC TCAGCTGCAA GGGGTTAGCG TCAACGACTA CGCCGGCAAC
CCCTTCCAGA TGGACGTGAA CTACCGCGGT TTCACGGCCA GCCCGCAGAT CGGCACGCCG
CAGGGCCTGT CGGTGTTCTT CGACGGTGTG CGGGTGAACG AGCCCTTCGG CGACGTGGTG
AACTGGGACC TGATCCCGCT CAACGCGATC GAGCGCTTCG ACCTGTTCCC CGGCAGCAAC
CCACTGTTCG GGCTGAACAC CCTGGGCGGC GCGATCTCGG TGCGCAGCAA GAACGGCTTC
ACCGCGCCCG GCGTCGAGGG TGAGCTGCTG GCCGGTTCCT GGGGCCGCCG GCAGGTCAAG
CTGAGCGCCG GTGGCAATGA CGACACGCTG GGCGGCTTCG TGGCCTACAC CGGCTTTCGC
GAGGACGGCT GGCGCGACAA CTCGCCGTCG CGCGTGCACC AGCTGTTCGG CCGCGGCGAC
CTGCGGCTGG ATCGCGGCTC GCTGTTCGCC AGCGCGCTGT TCGCGAGCAA CGAGCTGATC
GGCAATGGGC TGATCCCTCT GTCGCTGTAC GAGCAGCGCG CCGAGACCGT GTTCACCTCG
CCCGACCGTT CCGACAACCG CGTGCTGCAG CTTGCGCTCG GTGGTCAGTT CGACGTCTCC
GAGCGCTTCA ACATCACCGG CCAGCTCTAC ACCCGCAAGA GCCGGCGCGG CGGCCTCAAC
GGCGACATCT ACGAAGGCTT CGACGACATG ATCGGCCTGC GCGGCGGCTA CTTCGATCCG
GACAATCCGG CAGCGGGCGT GCAGCCACGC AACGGCGCCT ACTACAACAC GCCCGGCGTG
ATCACCGGCA CGCCGATCGG CCTGCTGACG GACACCGCAC TGGATCAGCG CACGCACGGT
GCCTCGCTGC AGTTCAACTG GAACCTGCCG ACGCGCAGCG TGATGGTGGG CGCCTCGATC
GACCGCAGCC GTTCGACCTA CTCGATGTTC CAGCGGCTCG GCCTGATCGA CGCCACGCAC
GGCGTCTATG CGGACCCGGC CGCGCTGCCG GCGTTCATCG CCGCGCAGAT GGACATTCCG
GGCAACAACT TCGAGGGCAC GTCGACCACG AAGAGCCTCT ACGCCAGCGA CACCTGGACG
CTGGCACCGC AGCTCACGCT CACCACCGCC GCGCGCTACA ACCACACCAC GGTCGACAAC
CAGTTGCTGA CGCGCACCGT CGAAGGCCTG GTCGATCTGC ACGAGCTGCC CGCCAACTAC
GACAACGCGC AGACGCTGAC GGCCGAGAAG TTCAGCTACC GCTCCCTCAA TCCGTCGATC
GGACTCAACT GGCTGCCGGC ACCGGGCCTC AACACCTTCG CCAACGTGAG CCGTGGATCC
CGCACGCCGT CGGTGGTGGA GCTCGGCTGC GCCTTCGACG ACACGCCCAC GCCGGTGACG
CTGCCGGGCG CGACGCCGAA CGACCCGCCG GTGGTGATCG GCACCACCGC GCGCAGCCTG
CTGGGGCCGG GCTGCAACCT GCCGACCACG CTGTCCGGCG ACCCCTACCT GCCGCAGATC
CGCTCCACCT CGTTCGAGCT CGGCGCGCGC GGTCTGCTGT CGGCGAACTG GGAGTGGAAC
GCAAGCCTCT TCCGCACCGA CCTGAAGGAC GACATCTACT ACGTCGGCGT GGGGCAGGGC
CGCAGCTACT TCGACACCAT CGGCAAGACG CGCCGCCAGG GCCTCGAGCT GGGCCTGCAG
GGACGCACCG GCGCGTTCGA CGTGAAGGCG AGCTACTCAT ACACGTCGGC GACCTTCGAG
TCGCCGTTCT ACATGACGAG CCCGCACAAC AGCAGCGCGG ACTTCGACCA GAACTCGCGC
ACCCAGGCCG ACCTGGGCTA CCGCGACTAC CAGCTGCTGC CTTCGCCCGG CGCGTCGCTG
AACGGCGGGC GCGGCACCTA CCACCAGATC CTGGTGAAGC CCGGCGCCCG CATGCCGGGC
ATCCCGGCGC ATGCCCTCAA CTTCAACCTC GGCTGGCGCG TCACGCCGTC GTGGAAGCTC
GGGCTGGGCA TGCAGCTGCG CTCGATGTCC TACGTGCGTG GCAATGAGAA CAACCTGCAC
CGCCCCGGCG GCACGGACCA GGAGACCGGC CAGTACTACT GCTCGACCAA CGTGCAGACG
CGCGCCTGCG ACCAGAGCGA TGGGGGCTAC ATCCAGACCC CGACGCGACC GGGCCGCACC
TTCACGCAGA AGGGCACGGT GCCGGGCTTC GCGGTCTTCA ACCTCGACAC CAGCGTCGTC
GTCACCAAGG GCTTCACCGT CGTCGCCCAG GTCACCAACC TGTTCGACCG CCGCTACGTC
ACGGCGGGCA ACCTGGGCGT GAACCCGTTC TCGCCGTCGA CCGTGGGCGC GATCGGCGCG
AGCGGCTGGA ACTACAACTC GGCCGAGTGG CAGCCGTCGA CCTTCGTCGG TCCCGGCGCG
CCGCGCGGCA TCTTCCTGGG GCTGTCCTAT GCGCTCGGCG CGGATTGA
 
Protein sequence
MSVRSRARKH RLTPLKRAVL SLATLASPLS TLAQQAPAAA ASAPEAAPSD AAVRLNPVLV 
PGKRATDVGP MPGLAVTKDQ IPANIQSATK EQIKESRALN IGDYMNTQLQ GVSVNDYAGN
PFQMDVNYRG FTASPQIGTP QGLSVFFDGV RVNEPFGDVV NWDLIPLNAI ERFDLFPGSN
PLFGLNTLGG AISVRSKNGF TAPGVEGELL AGSWGRRQVK LSAGGNDDTL GGFVAYTGFR
EDGWRDNSPS RVHQLFGRGD LRLDRGSLFA SALFASNELI GNGLIPLSLY EQRAETVFTS
PDRSDNRVLQ LALGGQFDVS ERFNITGQLY TRKSRRGGLN GDIYEGFDDM IGLRGGYFDP
DNPAAGVQPR NGAYYNTPGV ITGTPIGLLT DTALDQRTHG ASLQFNWNLP TRSVMVGASI
DRSRSTYSMF QRLGLIDATH GVYADPAALP AFIAAQMDIP GNNFEGTSTT KSLYASDTWT
LAPQLTLTTA ARYNHTTVDN QLLTRTVEGL VDLHELPANY DNAQTLTAEK FSYRSLNPSI
GLNWLPAPGL NTFANVSRGS RTPSVVELGC AFDDTPTPVT LPGATPNDPP VVIGTTARSL
LGPGCNLPTT LSGDPYLPQI RSTSFELGAR GLLSANWEWN ASLFRTDLKD DIYYVGVGQG
RSYFDTIGKT RRQGLELGLQ GRTGAFDVKA SYSYTSATFE SPFYMTSPHN SSADFDQNSR
TQADLGYRDY QLLPSPGASL NGGRGTYHQI LVKPGARMPG IPAHALNFNL GWRVTPSWKL
GLGMQLRSMS YVRGNENNLH RPGGTDQETG QYYCSTNVQT RACDQSDGGY IQTPTRPGRT
FTQKGTVPGF AVFNLDTSVV VTKGFTVVAQ VTNLFDRRYV TAGNLGVNPF SPSTVGAIGA
SGWNYNSAEW QPSTFVGPGA PRGIFLGLSY ALGAD