| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2252 |
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| Symbol | |
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| ID | 4785091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2410899 |
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| End bp | 2414423 |
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| Gene Length | 3525 bp |
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| Protein Length | 1174 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640090820 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001021443 |
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| Protein GI | 124267439 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.353528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.94108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCGT CCCCGAGCTT CGTTCACCTC CGTACCCACA CCGAGTACTC CGTCGTCGAC
GGGATGCTGC GTGTGGACGA CATGGTGGCC GCGGCGGCGG CCGATGAGCA ACCCGCGCTG
GCGATCACCG ATCTGTCGAA CCTGTTCGGT GCGATCAAGT TCTACGGCGC GGCGCGCGGC
AAGGGCGTGC AGCCGCTGAT CGGTGCGGAT CTGTGGCTCG AGGCCGAGAG CGACGAGAAG
CAGCCGAGCC GCTTGCTGCT GCTGGTGCAG AACCGCACTG GCTACCTGAA CCTCTGCGAG
CTGATCTCGC ACGCGTGGAC CGAGAACCTG CAGCGCCACC AGGCCTGCGT GGCATGGCCT
CAGTTGGCGA AGCATGGCGA TGGACTGATC GCGCTGTCCG GCGCCGACCT GGGCGCGGTC
GGGTTGGCGC TGCTGGCCGG TGATGCGGTG CGGGCCGAGG CGCAGGCGCT GCGGCTGGCC
GCGCTGTTCC CTGGGCGCTT CTATCTCGAA TTGCAGCGTG CCGGGCAAGC CGGCAACGAG
GCCCAGGTGA GGGCGGTGGT ACCGCTCGCC GCGAAGCTGG GCCTGCCGGT GGTGGCGACG
CATCCAGTGC AGTTCCTGAG TGCCGATGAT TTCGAGGCCC ACGAGGCCCG CGTCTGCATC
GCCGAAGGCG AGACGCTCAC CAATCCTCGC CGCGTCAAGC GCTTCACGCG TGAGCAGCAT
TTCAAGACCG CCGCGCAGAT GGTCGAGCTG TTTGCCGACA TTCCCTCGGC GATCGCCAAC
ACGCTGGCGA TTGCGCGCCG CTGTCATCTG ACGCTGACGC TCGGCAAACC GCAGCTGCCC
GACTTTCCGA CACCGATCGT CGACGGACAG CGCATGGCGC CGGACGACTA CTTTCGCCAC
GCCTCGCACG CCGGGCTGAA CGAGCGGCTC GCGCAGCTCT ACCCGAACGA GGACGAGCGC
GAGCGTCATC GCGCACGCTA CGTCGAGCGG CTGGACTTCG AGATCGAGAC GATCCTGAAG
ATGGGCTTCC CGGGCTATTT CCTGATCGTG GCCGACTTCA TCAACTGGGC CAAGGGCAAC
GGCTGTCCGG TCGGGCCCGG GCGGGGCTCG GGCGCCGGCT CGCTGGTGGC CTACGCGCTG
AAGATCACCG ACCTCGACCC GCTTGCCTAC AACCTGCTCT TCGAGCGCTT CCTGAATCCG
GACCGCGTGT CGATGCCCGA TTTCGACATC GACTTCTGCC AGGGCAACCG CGATCGCGTG
ATCGACTACG TGAAGCAGAA GTACGGCCGC GATGCGGTGA GCCAGATCGC CACTTTCGGC
ACGATGGCCG CCAAGGCCGC GCTGCGCGAC GTGGGCCGCG TGCTGGGCAT GGGCTACGGC
CACGTCGACA GCATCGCCAA GCTGGTGCCG GCGCCACCCG GCAAGACGGT GACGCTGAAG
CGCCCCGGCG ACAGGCCTGA CCCGGGCCTG ATCTACGCCC GAAAGGAGGC CCCGGAGATC
GAGCAGCGCG AGCAGAAGGA GGAGGAGGTC GCCGAACTGC TGGCGCTGGC CGAACGCGTG
GAAGGCACGG TGCGCAATAT CGGCATGCAC GCCGGTGGCG TGCTGATCGC GCCGGGCAAG
ATCACAGACT TCTGTCCGCT CTACCAGCAG CCGGGCAGCG ATTCGGCGGT GAGCCAGTAC
GACAAGGACG ACGTCGAGGC GATCGGACTC GTGAAGTTCG ACTTCCTCGG CCTCGCCACG
CTGACGATCC TGGAACTGGC CAAGGACTTC ATCCGGACGC GCCACGCCGA TCGCGCCGAC
TTCGCGTTCG AGAACATCGC TCTCGACGAC CGCAAGACCT ACCAGCTGCT GAGCGAGGGC
AAGACGGTCG CGGTGTTCCA GCTGGAAAGT CGTGGCATGC AGGGCATGTT GCGCGAGGCC
CGGCCCAGCG TGTTCGAGGA CATCATCGCG CTGGTGGCGC TTTACCGTCC GGGCCCGATG
GACCTGATCC CGAGCTTCTG TGCCCGCAAG CACGGCAAGG AGGAAGTGGA CTATCCCCAT
CCGCTGATGC GCGAGGTGCT CGAGGAGACC TACGGGATCA TGGTCTACCA GGAGCAGGTG
ATGCAGGTCG CGCAGCGCCT GGGCGGGTAC TCGCTCGGCG GCGCGGACCT GCTGCGTCGC
GCGATGGGGA AGAAGAAGGC CGAGGAGATG GCCAAGCACC GCGTCATCTT CGCGGAAGGT
GCTGCGAAGA ACGGCATCGG CGCAGGTCTC GCGAACGAGA TCTTCGACCT GATGGAGAAG
TTCGCGGGCT ACGGCTTCAA CAAGTCGCAT GCCGCGGCCT ATGCGCTGCT GGCCTACCAC
ACGGCCTGGG CCAAGGTGCA TTACCTGGCC GAGTTCACCG CGGCCAACAT GAGCGTCGCG
CTGGACGACA CCGACAAGCT CAAGATCTTC CACGATGACG CGGTGTCCCT GGGCGTGGTG
TTCGAGGCAC CCGACGTCAA TGCCGGCGGC TACCGCTTCG AGCCGGTGGC GCCGCAGGGC
AAGGAGCGAG GCCGCGTGCG CTACGGACTC GGCGCCATCA AGGGCACGGG GCAGGGCGCC
ATCGAGGCGA TCGTCGACGC GCGCCGCGAA GGCGGTCCAT ACAAGAGCCT GTTCGACTTC
GCCGCGCGAG TGGACCGCAG TCGCGTCAAC AAGCGGGTGG TCGAAGCACT GATCAAGGGT
GGGGCCTTCG ACGCGCTCGA AGCCGACCGG GCGGTGCTGA TGGCCAGCGT GCCGCTCGCC
TTCGAGTACG CAGACACGCA GGCGGCGAAC GCCGACCAGG GCGGCCTGTT CGACTTCGGC
GACTCGCATG CCGCCTCGAC CAACGAGCCC GATCTCGTGG CGACGGAAGC CTGGAGCATC
AAGGAACGGC TGACGCACGA GAAGGCGGCT CTGGGCTTCT ATCTCTCGGG CCATCTGTTC
GACGAATGCG AGACCGAGGT GCGGCAGTTC GCGCGGCGCC GCATCGCTGA CCTGCTCGAT
AGCCGGGAGC CGCAGTTGCT GGCGGGGATC GTCACCGAGT TGCGGGTCGT CAACGGTCAG
CGTGGCCGGG TTGCGATCTT CAAGCTCGAC GACAAGAGCG AGACGATCGA GGCCGTGGCG
AACGAGGATC TGCTCAACGC GCACCGCGAA CAATTGGTGG AGGATGAGTT CATCGTCGTG
CAGGGCAAGG TGCAGCCCGA CCGCTTTTCG GGGGGCGTGC GGCTCAATGT GCAGCAGGTG
TGGGATCTGG CTGCAGCGCG CTGTCGCTTC GGCCGCTATC TGCGCGTGGC CGTGAACGGC
GTCACGCCAC CGATCGACGA ACTGCTGCGC GAGTTCCCTC CGCGCACCTT GCGCACCGAC
CAGGGTGACC TGGTCCAGGG CCTGCCAGTG CGCGTGGTGC TGCACCGCGA GGCGGTGCAG
GGCGAGATCG ACCTCGGCGA CGATGGCCGC TTCTTCCCGA CCGACACGGC CCTGGCGCGC
TGGAAAGCCA GCACCCACGG CCAGGCCGCG GTGGTGTACG AGTGA
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| Protein sequence | MTSSPSFVHL RTHTEYSVVD GMLRVDDMVA AAAADEQPAL AITDLSNLFG AIKFYGAARG
KGVQPLIGAD LWLEAESDEK QPSRLLLLVQ NRTGYLNLCE LISHAWTENL QRHQACVAWP
QLAKHGDGLI ALSGADLGAV GLALLAGDAV RAEAQALRLA ALFPGRFYLE LQRAGQAGNE
AQVRAVVPLA AKLGLPVVAT HPVQFLSADD FEAHEARVCI AEGETLTNPR RVKRFTREQH
FKTAAQMVEL FADIPSAIAN TLAIARRCHL TLTLGKPQLP DFPTPIVDGQ RMAPDDYFRH
ASHAGLNERL AQLYPNEDER ERHRARYVER LDFEIETILK MGFPGYFLIV ADFINWAKGN
GCPVGPGRGS GAGSLVAYAL KITDLDPLAY NLLFERFLNP DRVSMPDFDI DFCQGNRDRV
IDYVKQKYGR DAVSQIATFG TMAAKAALRD VGRVLGMGYG HVDSIAKLVP APPGKTVTLK
RPGDRPDPGL IYARKEAPEI EQREQKEEEV AELLALAERV EGTVRNIGMH AGGVLIAPGK
ITDFCPLYQQ PGSDSAVSQY DKDDVEAIGL VKFDFLGLAT LTILELAKDF IRTRHADRAD
FAFENIALDD RKTYQLLSEG KTVAVFQLES RGMQGMLREA RPSVFEDIIA LVALYRPGPM
DLIPSFCARK HGKEEVDYPH PLMREVLEET YGIMVYQEQV MQVAQRLGGY SLGGADLLRR
AMGKKKAEEM AKHRVIFAEG AAKNGIGAGL ANEIFDLMEK FAGYGFNKSH AAAYALLAYH
TAWAKVHYLA EFTAANMSVA LDDTDKLKIF HDDAVSLGVV FEAPDVNAGG YRFEPVAPQG
KERGRVRYGL GAIKGTGQGA IEAIVDARRE GGPYKSLFDF AARVDRSRVN KRVVEALIKG
GAFDALEADR AVLMASVPLA FEYADTQAAN ADQGGLFDFG DSHAASTNEP DLVATEAWSI
KERLTHEKAA LGFYLSGHLF DECETEVRQF ARRRIADLLD SREPQLLAGI VTELRVVNGQ
RGRVAIFKLD DKSETIEAVA NEDLLNAHRE QLVEDEFIVV QGKVQPDRFS GGVRLNVQQV
WDLAAARCRF GRYLRVAVNG VTPPIDELLR EFPPRTLRTD QGDLVQGLPV RVVLHREAVQ
GEIDLGDDGR FFPTDTALAR WKASTHGQAA VVYE
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