| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2244 |
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| Symbol | rpsA |
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| ID | 4785376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 2403875 |
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| End bp | 2405590 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640090812 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001021435 |
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| Protein GI | 124267431 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.777167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAA CCGCAACTGC CTCGTCGCAA GGCATGGAAT CGTTCGCCGC CCTGTTCGAG
GAGTCGCTCA AGCGCTCCGA CATGCGTGCT GGCGAGGTGA TCACTGCCGA GGTGGTCCGC
ATCGAGCACA GCTTCGTGGT CGTCAATGCC GGCCTCAAGA GCGAAGCCTA TGTGGCGATC
GAAGAGTTCA AGAACGACCA GGGCGAGCTC GAAGTCCAGG TCGGCGACTT CGTCTCCGTC
GCGATCGACG CGATCGAGAA CGGTTACGGC GACACCATCC TGTCTCGCGA CAAGGCCAAG
CGCCTCGCGT CGTGGATGTC GCTCGAGACC TCGCTCGAGT CCGGCGACTT CGTGACCGGT
ACCGTCAACG GCAAGGTCAA GGGCGGCCTG ACCGTGCTGG TCAACGGCAT CCGTGCCTTC
CTCCCCGGCT CCCTGCTCGA CACGCGTCCG GTCAAGGACA TGACGCCGTT CGAAGGCAAG
ACCATGGAGT TCAAGGTCAT CAAGCTCGAC CGCAAGCGCA ACAACGTCGT GCTGTCACGC
CGCGCCGTGG TCGAGGCCTC GATGGGTGAA GAGCGCGCCA AGCTGCTCGG CACGTTGCGC
GAAGGCGCCT TCGTCAACGG CGTGGTCAAG AACATCACCG AATACGGCGC GTTCGTCGAC
CTCGGCGGCA TCGACGGCCT GCTGCACATC ACCGACATGG CCTGGCGCCG CGTGCGTCAC
CCGAGCGAGG TGGTCACGGT CGGTCAGGAA CTGACCGCCA AGGTGCTGAA GTTCGACGCC
GAGAAGAACC GCGTCTCGCT GGGCCTCAAG CAGATGGGCG ACGACCCGTG GGTCGGCGTC
TCGCGTCGCT ACCCGACCGG CACCCGCCTG TTCGGCAAGA TCACCAACAT CGCCGACTAC
GGCGCGTTCG TCGAGATCGA GCCCGGCATC GAAGGCCTGG TGCACGTCTC GGAGATGGAC
TGGACCAACA AGAACATCGC CCCGTCCAAG CTCGTCACGC TGGGCGAAGA GGTCGAGGTC
ATGGTGCTCG AGATCGACGA GGACAAGCGC CGCATCAGCC TGGGCATGAA GCAGTGCAAG
GCCAACCCGT GGGACGAATT CGCGCAGAAC CACAAGCGCG GCGACAAGCT CAAGGGCCCG
GTCAAGTCGA TCACCGACTT CGGCGTGTTC GTCGGCCTGG CTGCCGGCAT CGACGGCCTG
GTGCACCTGT CCGACCTGTC CTGGCACGAG CCGGGCGAGG CCGCCGTGCG CAACTACAAG
AAGGGCCAGG AAGTCGAGGC CCTCGTGCTG GCGATCGACG TCGAGCGCGA GCGCATCTCG
CTGGGCATCA AGCAGCTCGA CGGTGATCCG TTCGCCACCT TCACCACGCT CAACGACCGT
GGCGCGACGG TGACGGGCAA GGTCAAGACG GTCGACGCGC GCGGCGCCGA GATCCAGCTG
ACCGACGACG TGACCGGCTA CCTTCGCGCC AGCGAAATCT CCCGCGATCG TGTGGAAGAC
GCCCGCAACG TGCTGAAGGA AGGCGACGAA GTCACGGCGC TGATCATCAA CGTCGACCGC
AAGACGCGTT CGATCCAGCT GTCGATCAAG GCCAAGGACA ACGTCGATAA CCAGGAAGCC
ATGCAGCGCC TGGCCCAGAC GTCCGAACGT GAAAACGCCG GCACCACGAG CCTCGGCGCC
CTGCTGAAGG CCAAGCTGGA CCAGAACAAC TCCTGA
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| Protein sequence | MSQTATASSQ GMESFAALFE ESLKRSDMRA GEVITAEVVR IEHSFVVVNA GLKSEAYVAI
EEFKNDQGEL EVQVGDFVSV AIDAIENGYG DTILSRDKAK RLASWMSLET SLESGDFVTG
TVNGKVKGGL TVLVNGIRAF LPGSLLDTRP VKDMTPFEGK TMEFKVIKLD RKRNNVVLSR
RAVVEASMGE ERAKLLGTLR EGAFVNGVVK NITEYGAFVD LGGIDGLLHI TDMAWRRVRH
PSEVVTVGQE LTAKVLKFDA EKNRVSLGLK QMGDDPWVGV SRRYPTGTRL FGKITNIADY
GAFVEIEPGI EGLVHVSEMD WTNKNIAPSK LVTLGEEVEV MVLEIDEDKR RISLGMKQCK
ANPWDEFAQN HKRGDKLKGP VKSITDFGVF VGLAAGIDGL VHLSDLSWHE PGEAAVRNYK
KGQEVEALVL AIDVERERIS LGIKQLDGDP FATFTTLNDR GATVTGKVKT VDARGAEIQL
TDDVTGYLRA SEISRDRVED ARNVLKEGDE VTALIINVDR KTRSIQLSIK AKDNVDNQEA
MQRLAQTSER ENAGTTSLGA LLKAKLDQNN S
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