| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2219 |
|---|
| Symbol | |
|---|
| ID | 4784824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 2374039 |
|---|
| End bp | 2375280 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640090787 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_001021410 |
|---|
| Protein GI | 124267406 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.568447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.728186 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAGAAAC CGCCCGTGAC CTCCGATTTC ACGATCCACC TGCCGACGCT GATGCTGCTG
GCCGTCGTCG TGATGGGAGC AACCGCGGCC ATCATGTCGG TGTTCGGCCT GAGCCAGCGC
GTCTACCGCG GCTACTGGTG GTGGGTGGGG GCCATGTGGC TGGCCACCCT GGGAGCGGCG
CTGCACGGAC TGCGCAACCT GTGGCCGGTG GCCGTGGTCC CGGCCTGCCT GCTGGTGATG
GTCTGGCCGG TGTTGATCAC CACCGGACTG CGCCGCTTCT TCTCGCGCGA CCGGCAGTTC
TCTTCGACGC GGATCGATGT CGCGCTGTAT GTCGCCTGCT ACCTCGGCTG GCTGGCTTGC
TGGCTGGCTT CCGCGCCGCA GCCGATCCGG TCGCTGGCCT ATGGCGCCGG CTCGCTGATC
CTGCTGCTTT ACGCCGCCGT TTTCATCGGC AAGCTCGACG ACTTCCGCCG CAGTCCGGCC
CTCAAGCTGC TGATGGCGGT GATGATCGTT CAGGCCGCCG TCCCCATGTT GCGCCTGGCG
GGCATGTTCT CCCAGGGCGC CGGCGCGCTG CCCGCCCAAT CGCTGGTGGT CACCGGCGTG
GTGCTGCCGT TGCTCCTGAG CATGCTGTTC ACGGTCTACC TCTGCCTGGT GCTCACGCAC
GAGCGCACCG TGCGCGACCT GCGCGAGACT CAGCGCCAGC TGCGCGTGCT GGCCGACATC
GACATGCTCA CCCAGGTGCC GAACCGCCGT CACTTCGAGG AATTGGCCAC CGCGATCGTC
GGCAACGGCG CCGCGCCGCC GTCGGTGCTG ATGCTGTTCG ACATCGACCA TTTCAAGCAC
GTCAACGACA ACCACGGCCA TGCCGTCGGC GATGCGGCGC TGCGGCTGGT CGCCCGCTGC
ACGCGCGACA CGCTGCGCAC ACGCGACGTG ATGGGCCGTG TCGGGGGCGA CGAGTTCATG
CTGCTGCTGC CAGGTGCGAG CGTTGACGAT GCGCTGCACG TGGCCGATCG CATCACGCGC
AATCTCGACC TGGCGAGCAA GAACTTCCCG CTGCCGTTGA GTCTGAGCTT CGGGCTGGTG
CAGATCCACA CAGGCGAATC GCTCGCCGCC GCACAGCACC GCGCCGACCT CGCCCTCTAC
GAGGCCAAGC GCCAGGGCCG CCGCCGCGCC GTGCCGGCCC GGCAGGACGG GCCCGATACG
GTGTTCGGTG AGAGCCGGTC GCTGGGGCTC GATCCGCTCT GA
|
|---|
| Protein sequence | MQKPPVTSDF TIHLPTLMLL AVVVMGATAA IMSVFGLSQR VYRGYWWWVG AMWLATLGAA
LHGLRNLWPV AVVPACLLVM VWPVLITTGL RRFFSRDRQF SSTRIDVALY VACYLGWLAC
WLASAPQPIR SLAYGAGSLI LLLYAAVFIG KLDDFRRSPA LKLLMAVMIV QAAVPMLRLA
GMFSQGAGAL PAQSLVVTGV VLPLLLSMLF TVYLCLVLTH ERTVRDLRET QRQLRVLADI
DMLTQVPNRR HFEELATAIV GNGAAPPSVL MLFDIDHFKH VNDNHGHAVG DAALRLVARC
TRDTLRTRDV MGRVGGDEFM LLLPGASVDD ALHVADRITR NLDLASKNFP LPLSLSFGLV
QIHTGESLAA AQHRADLALY EAKRQGRRRA VPARQDGPDT VFGESRSLGL DPL
|
|---|
| |