| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2215 |
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| Symbol | |
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| ID | 4784820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 2368286 |
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| End bp | 2369665 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640090783 |
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| Product | hypothetical protein |
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| Protein accession | YP_001021406 |
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| Protein GI | 124267402 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.221067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.771798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCC TGCCTTCCCT GCGTCACACC TTGCTGAGCA GCCGCGACCT GCTGATGACC
GCCGGCCCGT TCGTGCTGCT GACGGTGGCG CTCCTGGCGC TGGCCTACTG GGCACTCGAC
CCGAGCCCGC CGAAGAAGCT GGTGCTGGCC ACCGGGCCGG AACAGGGGGC GTACGCCGAG
TTCGGCAAAC GCTACCAGGC GGCGCTGGCC AAGCACCGCA TCCAGGTCGA ACTGCGCACG
ACCCAGGGCG CGGCGGAGAA CCTGAAGTTG CTCGAAGACC CGGACTCGGG CGTCGACTTC
GGCTTCGTAC AGGGCGGTGC CGGTCGCCTG CGAGGCGGCG ACGAAGCGCC GCCACCGGAT
CTGGTGTCGC TGGGCAGCCT GTTCTACGAG CCGATCTGGC TGTTCTATCG CGAGGACAGC
GCCAGGCGGC TGATCGGCAG CGATCGGCTC GACTCGGTGG CGAAGCTCAA GGGCTGGCGC
GTCAACATCG GGGCCCAGGG CAGCGGCATC ACCAACCTGA TGCGACGGCT GCTCGACACC
AACGGCCTCG GGCCCGAGGA CATCGTCGCC CAGCGGCTGA CGCAGACCCC AGCCGTCGTG
AGCCTGCTCG ATGGCAACAC CGACGCGCTG GCGCTGGTGT CCGCGCCCGA GGCGCCGATG
GTGCAGTTGC TGCTGCTGAC GCCCGGCATC CGCCTCATGA GCTTCGATCA GGCCGAAGCG
TACGCGCGCC GCCTGCCGAT GCTCACGCCG GTGAGCCTGC CGCGCGGCGT GGTGAAGCTG
GCCGAGGACG TGCCGCCCGA GGACATCGAG CTGCTGGCCC CGACGGCCGC GCTGGTGGCG
CGCGCATCGG CCCATCCGGC CCTGCAGCAG CTGTTCGTGC AGGCCGCCAA CGCGATCCAC
AGCGAAGCGG GCTGGTTCCA GCGCCGCGGC GAGTTTCCGA ACCGGCGCGC CGTGGAACTG
CCGATGTCGA AGGAGGCCGA CCGCTTCTTC GAGACCGGTC CGCCCTGGCT GCAGCGCTAC
CTGCCGTTCT GGGTCGCGAA CCTGATCGAC CGGATGTGGG TGGTGTTGGC CTCGATCATC
GTGGTGCTGA TCCCGCTGTC GCGCGTGGTG CCGCCGCTGT ACGAACTGCG CATCCGCTCG
CGGGTGTTCC GCTGGTACGG CCGGCTGCGC CAGATCGAGG AAAGCCTGGC CGACGCCCCG
GACGGGCCGG CCGATGCCCA GCCGCTGATG GACGAGCTCG ACGCTCTCGA TGCCCGCGTC
AAGCAGTTGC AGGTCCCGCT GTCGCATGCC GACGAGCTGT ATGCGTTGCG CAGCCACATC
GACCTGGTGC GCAAGAAGCT GCGCGCACTG GGCGCCCAGA CCCCGGCAGC CTCCCCATGA
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| Protein sequence | MPRLPSLRHT LLSSRDLLMT AGPFVLLTVA LLALAYWALD PSPPKKLVLA TGPEQGAYAE
FGKRYQAALA KHRIQVELRT TQGAAENLKL LEDPDSGVDF GFVQGGAGRL RGGDEAPPPD
LVSLGSLFYE PIWLFYREDS ARRLIGSDRL DSVAKLKGWR VNIGAQGSGI TNLMRRLLDT
NGLGPEDIVA QRLTQTPAVV SLLDGNTDAL ALVSAPEAPM VQLLLLTPGI RLMSFDQAEA
YARRLPMLTP VSLPRGVVKL AEDVPPEDIE LLAPTAALVA RASAHPALQQ LFVQAANAIH
SEAGWFQRRG EFPNRRAVEL PMSKEADRFF ETGPPWLQRY LPFWVANLID RMWVVLASII
VVLIPLSRVV PPLYELRIRS RVFRWYGRLR QIEESLADAP DGPADAQPLM DELDALDARV
KQLQVPLSHA DELYALRSHI DLVRKKLRAL GAQTPAASP
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