Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A2170 |
Symbol | |
ID | 4784859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 2327667 |
End bp | 2328107 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640090738 |
Product | succinate dehydrogenase subunit C |
Protein accession | YP_001021361 |
Protein GI | 124267357 |
COG category | [C] Energy production and conversion |
COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.215458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAGA CCACCGTGAA AGCAGGCCGG CCGCGTCCGG TCCACCGCAA CATCCACGTC AGCCAGATCA TCGGCTACCG GCTGCCCCCT GCCGGCATCG TGTCGATCCT GCACCGCATC AGCGGCGCGA TCATGTTCCT GCTGTTGCCC TTCATCGTCT GGCTGTTCGA CACCAGCCTG AGCTCCGAAA TCTCCTACGA GACCTTCACC AGTGCCTTCG TCGCCGGGAT CGGCTTCGTG CCGGGCTGGT TCGTCAAGCT GGTGGCGCTG GCCCTGATCT GGGCCTACCT GCTGCACTTC ATCGCCGGCG TGCGCCATCT GTGGATGGAC GTGACGCATG CCGTCAGCAA GGAGGCGGGG CACCGCTCGG CCCTGATCAC CCTGGGCCTG AGCACGCTGC TGACGCTGGC GCTGATGGGT AAGCTGTTCG GCTGGTACTG A
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Protein sequence | MAETTVKAGR PRPVHRNIHV SQIIGYRLPP AGIVSILHRI SGAIMFLLLP FIVWLFDTSL SSEISYETFT SAFVAGIGFV PGWFVKLVAL ALIWAYLLHF IAGVRHLWMD VTHAVSKEAG HRSALITLGL STLLTLALMG KLFGWY
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