| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2168 |
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| Symbol | |
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| ID | 4784857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2325466 |
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| End bp | 2327256 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640090736 |
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| Product | succinate dehydrogenase subunit A |
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| Protein accession | YP_001021359 |
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| Protein GI | 124267355 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.274751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCA AGCTTCCGAC CCGCAAGTTC GACGTCGTCA TCGTCGGAGC CGGTGGCTCC
GGCATGCGCG CCTCGCTGCA ACTCGCTCGT GCCGGCCTGA ACGTGGCCGT GCTGTCCAAG
GTGTTCCCGA CCCGCTCGCA CACCGTCGCG GCGCAAGGCG GCATCGGCGC CTCGCTCGGC
AACATGTCCG AGGACAACTG GCACTACCAC TTCTTCGACA CCGTCAAGGG CTCCGACTGG
CTCGGCGACC AGGACGCGAT CGAGTTCATG TGCCGCGAAG CGCCCAAGGT CGTCTACGAG
CTCGAGCATT TCGGCATGCC GTTCGACCGC AACCCGGACG GCACGATCTA CCAGCGCCCG
TTCGGCGGCC ACACCGCGAA CTACGGCGAG AAGCCGGTGC AGCGCGCCTG CGCCGCGGCC
GACCGCACCG GCCACGCGAT GCTGCACACG CTGTACCAGC AGAACGTCAA GGCGCGCACG
CAGTTCTTCG TCGAGTGGAT GGCGCTCGAC CTGATCTGCG ACGCTGACGG CGACGTGGTC
GGCGTCACCG CGCTCGAGAT GGAGACCGGT GACGTCCACG TGCTGCAAGG CAAGACCGTG
CTGCTCGCCA CCGGTGGGGC GGGTCGCATC TTCGCGGCCA GCACCAACGC CTTCATCAAC
ACCGGCGACG GCCTGGGCAT GGCGGCTCGT GCCGGCATCC CTCTGGAGGA CATGGAGTTC
TGGCAGTTCC ACCCGACCGG GGTGCACAAC GCTGGCGTGC TGCTGACGGA AGGCTGTCGT
GGCGAAGGCG CGATCCTGCG CAACAGCAAC GGCGAGCGCT TCATGGAGCG CTACGCGCCG
ACGCTGAAGG ACCTGGCGCC GCGCGACTTC GTGTCGCGCT GCATGGACCA GGAGATCAAG
GAAGGGCGCG GCTGCGGTCC GAACAAGGAC TACATCCAGC TCGACATGAC CCACCTCGGC
GGCGAGACGA TCATGAAGCG CCTGCCGAGC GTGTTCGAGA TCGGCCACAA CTTCGCGAAC
GTCGACATCA CGAAGGAGCC GATCCCGGTC GTGCCGACCA TCCACTACCA GATGGGTGGC
ATCCCGACGA ACGTTCACGG CCAGGTGGTG GTGCCGAACA ACGGCAAGCC CAACGACATC
GTCAACGGCC TCTATGCGGT CGGCGAGTGC GCCTGCGTCA GCGTGCACGG CGCCAACCGG
CTGGGCACGA ACTCGCTGCT CGACCTGCTG GTGTTCGGCC GCGCGGCGGG CAACCACATC
GTCGAGTTCA ATCAGAAGAA CAAGCTGCAC AAGTCCCTGC CCGCCGATGC TGCCGATCGC
ACGCTGGCAC GCCTGGCGCG CCTCGACGGC AGCAGCAGCG GCGAGTACGC CCAGGATGTG
GCCAACGACA TCCGCACGAC GATGCAGCAG CACGCCGGCG TGTTCCGCAC CCAGGCGATG
CTCGACGAGG GCGTGACCAA GATGGCCGCG GTGGCCGAGC GCGTGCGGAG CATCGCGCTG
AAGGACAAGT CCAAGGTCTT CAACACCGCC CGCATCGAGG CGCTGGAAGT CGAGAACCTG
ATCGAGGCGG CGCAGGCCAC CATCGTGTCG GCCGCGGCCC GCAAGGAAAG CCGGGGCGCG
CACACGGTCA ACGACTACGG CGACACGCCC GAGCATCCGA ACGGCCGCAA CGATGCCGTG
TGGATGAAGC ACACCCTCTG GTACAGCGAT GGCAACCGGC TCGACTACAA GCCGGTCAAC
CTCAAGCCGA TGTCGGTCGA GTCGATCCCC CCCAAGGTCC GCACGTTCTG A
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| Protein sequence | MTTKLPTRKF DVVIVGAGGS GMRASLQLAR AGLNVAVLSK VFPTRSHTVA AQGGIGASLG
NMSEDNWHYH FFDTVKGSDW LGDQDAIEFM CREAPKVVYE LEHFGMPFDR NPDGTIYQRP
FGGHTANYGE KPVQRACAAA DRTGHAMLHT LYQQNVKART QFFVEWMALD LICDADGDVV
GVTALEMETG DVHVLQGKTV LLATGGAGRI FAASTNAFIN TGDGLGMAAR AGIPLEDMEF
WQFHPTGVHN AGVLLTEGCR GEGAILRNSN GERFMERYAP TLKDLAPRDF VSRCMDQEIK
EGRGCGPNKD YIQLDMTHLG GETIMKRLPS VFEIGHNFAN VDITKEPIPV VPTIHYQMGG
IPTNVHGQVV VPNNGKPNDI VNGLYAVGEC ACVSVHGANR LGTNSLLDLL VFGRAAGNHI
VEFNQKNKLH KSLPADAADR TLARLARLDG SSSGEYAQDV ANDIRTTMQQ HAGVFRTQAM
LDEGVTKMAA VAERVRSIAL KDKSKVFNTA RIEALEVENL IEAAQATIVS AAARKESRGA
HTVNDYGDTP EHPNGRNDAV WMKHTLWYSD GNRLDYKPVN LKPMSVESIP PKVRTF
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