Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A2159 |
Symbol | truA |
ID | 4785823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 2314821 |
End bp | 2315603 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640090727 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_001021350 |
Protein GI | 124267346 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0844535 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTGG CCCTGGGCCT GAGCTATCGC GGCGGCGCCT ACCGGGGCTG GCAGAGCCAA CCCGACGGAC TCACGGTGCA GGACCGGGTC GAGGAGGCCC TGGCCCGCTT CGCCGATCGG CCGGTGCGCA CCGTGTGCGC CGGGCGCACC GACGCTGGCG TGCATGCGCT CAACCAGGTG GTCCATCTCG ACACCGAGAT CGAGCGTGAG CCGTTCTCCT GGGTGCGCGG CACCAACCGC TACCTGCCTC CTGATATCGC CGTGCAATGG TGCCGGCCGG TCGATGCCGC CTTCCACGCG CGCAACAGCG CGCGTGGAAG GCGCTATGCC TACCTGCTGC TGGAGTCCCC CGTGCGGCCG GCCATCGAGG CCGGTGCCGT CGGCTGGGTG TTCCGGCCAC TCGATGCGAC GCCCATGCGC GAGGCGGCAG CCCACCTGAT CGGCGAGCAT GATTTCAGCG CCTTCCGCTC AGCCGAGTGC CAGGCGGCCA GCCCGGTGAA GAACCTGAGG CGTATCGAGA TCGTTCGCTG CGGCGCCTAC TGGCGTTTTG AGTTCGAGGC TAGCGCCTTT CTCCACCACA TGGTCCGCAA CTTGATGGGC TGCCTGCTGG CCGTAGGGCA GGGTGTGCGA GCGCCGCAGT GGCTGGCCGA GGTGCTGGCC GCGGGCGATC GCCGCCGGGC TGCGCCCACC TTTGCCCCGG ATGGCCTGTA TTTCCTCGGT CCGCAATACG ATGCGAACCT CGACCTGCCC GAACGCACGC CCGCGTTCGA CTGGCTGCCC TGA
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Protein sequence | MRLALGLSYR GGAYRGWQSQ PDGLTVQDRV EEALARFADR PVRTVCAGRT DAGVHALNQV VHLDTEIERE PFSWVRGTNR YLPPDIAVQW CRPVDAAFHA RNSARGRRYA YLLLESPVRP AIEAGAVGWV FRPLDATPMR EAAAHLIGEH DFSAFRSAEC QAASPVKNLR RIEIVRCGAY WRFEFEASAF LHHMVRNLMG CLLAVGQGVR APQWLAEVLA AGDRRRAAPT FAPDGLYFLG PQYDANLDLP ERTPAFDWLP
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