| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2140 |
|---|
| Symbol | |
|---|
| ID | 4785804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2295800 |
|---|
| End bp | 2297077 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640090708 |
|---|
| Product | putative 3-deoxy-D-manno-octulosonic-acid transferase transmembrane protein, gene |
|---|
| Protein accession | YP_001021331 |
|---|
| Protein GI | 124267327 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTGA AGGCCGGCTT CGCGCGCTTC GTCTACGGCA GCCTGTTGCG CGCGCTGAGC
CCGGTCTACG CGCTGCGGCT GTGGTGGCGC GGGCGCGCCG AACCGCCGTA CCGCCAGGCC
ATCGGCGAGC GCTTCGGCCG CTATGCCGGG ACCGCGGTGC CCGGCGCGGT GTGGATCCAT
GCCGTGTCGC TCGGCGAGAC CCGGGCCGCC CAGGCGCTGG TCGATGCGCT GCGCGACGAA
CAGCCGTCGC TGCGCCTGCT GCTCACCCAC GGCACGGCGA CCGGGCGCGA GGCCGGCGCC
GCCCTGCTGC GCGCCGGTGA CGCCCAGACC TGGCTGCCCT ACGACACGCC GGGCGCGACG
CGCCGCTTCC TGGCCCATTG GCGGCCGGCG GTCGGCGTGC TGATGGAAAC CGAGGTGTGG
CCCAACTTGA TGCGCAGCGC CGCCGCCGCC GGCGTGCCTG TGCTGCTGGC CAATGCCCGC
CTCAGCGAGA AGAGCCTGCG ACGCGGTGCG CGCTTCGCGG TACTGCTGAG GCCGGCCTTC
GCGGCGCTCG TGCGCGTGCT GGCGCAGACC GAGGCCGACG CGGCACGCCT GCGCGACGCC
GGCGCACGCC GCGTCGACGT GATGGGTAAC CTGAAGTTCG ACGTGGATCC CGATGCCGCG
CTGTGCCGGC TCGGCGAACG CTGGGCGCAG GCGAGCGGCC GGCCGCTGGT GCTGGCGGCC
AGCACCCGCG AGGGCGAGGA GGCCGCGCTG CTGGCCGCCT GGCAGGCCCG GCCCGCGCCG
CGCCCGCGGC TGCTGCTGGT GCCGCGCCAC CCGCAGCGAT TCGACGAGGT GGCGGCACTG
GTCGAGCGCA GCGGCGCGTC GCTGTCGCGC CGCAGTGCGT GGTTCGACGA CCAGCCCGGC
GAGGTGGCTC AGGCCGCCGA CGTCTGGCTG GGGGACACGC TGCGCGAGAT GCCGGCCTAC
TACGCGGCCG CGCGCGTCGC GCTGCTCGGC GGCAGCTTCG AGCCGCTGGG CGGGCAGAAC
CTGATCGAGG CGGCCGCCTG CGGGTGCCCG GTGCTGATGG GGCCGCACAC CTTCAACTTC
GCCGATGCGG CGCAGCGCTC GCTCGCGGCA GGTGCCGCCG AGCGGGTGGC CGACATCGAC
ACCGGCGTGC TGCGCGCGAT CGCGCTCACC GCCGACGAGC CGCTGCGTGC GCGCATGGCG
CAGGCAGCGC TGGCGTTCTC GGCGGCGCAC CGCGGCGCTG CGCAGCGCAT GGCGGCGGCG
GTGGTCGCCA CGCTGTGA
|
|---|
| Protein sequence | MDVKAGFARF VYGSLLRALS PVYALRLWWR GRAEPPYRQA IGERFGRYAG TAVPGAVWIH
AVSLGETRAA QALVDALRDE QPSLRLLLTH GTATGREAGA ALLRAGDAQT WLPYDTPGAT
RRFLAHWRPA VGVLMETEVW PNLMRSAAAA GVPVLLANAR LSEKSLRRGA RFAVLLRPAF
AALVRVLAQT EADAARLRDA GARRVDVMGN LKFDVDPDAA LCRLGERWAQ ASGRPLVLAA
STREGEEAAL LAAWQARPAP RPRLLLVPRH PQRFDEVAAL VERSGASLSR RSAWFDDQPG
EVAQAADVWL GDTLREMPAY YAAARVALLG GSFEPLGGQN LIEAAACGCP VLMGPHTFNF
ADAAQRSLAA GAAERVADID TGVLRAIALT ADEPLRARMA QAALAFSAAH RGAAQRMAAA
VVATL
|
|---|
| |