| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2106 |
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| Symbol | |
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| ID | 4784325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 2254759 |
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| End bp | 2255325 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640090674 |
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| Product | putative RNA polymerase sigma factor transcription regulator protein |
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| Protein accession | YP_001021297 |
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| Protein GI | 124267293 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0670203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTTCCG ACAAAGAACT CAGCGACTTC CTCAAGAGCG TCGAAAAGCG CGCCTTCAAG
CGCGCCGTTT ATGCCGTTCG CGACGACGAT GCTGCGCTCG ACATCGTGCA GGACTCGATG
ATCCGCCTGG CCGAAAAATA TGCCGACCGG CCGCCGGCCG AATTGCCGCT GCTGTTCCAG
CGCATCCTGT CGAACGCCAT GATGGACTGG TTCCGCCGGC AGAAGGTGCG CAATGCAGTC
GTGCGCAATT TCTCGGATTT CGAGCCAGCG GACGCCGACG GCGACTTCGA TCTGCTCGAG
ACTCTGGCGG CCGCCGGTGG TGCTACCGCG GTCGAAACGG CGGCCGACAG CGTGTCGCGG
GCCCAGATCC TGCTCGCGAT CGAGACCGAA GTCGCGCGGT TGCCGGGGCG TCAACGGGAG
GCCTTCCTGC TGCGTTACTG GGAGGAACTC GATGTCGCCG AGACCGCTCA ATCGATGGGC
TGCTCGGAGG GCAGCGTCAA GACCCACTGC TCCCGGGCAG TGCACAGCTT GGCGCAGGCC
TTGAAGGCCA GAGGGGTGCT GCCATGA
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| Protein sequence | MASDKELSDF LKSVEKRAFK RAVYAVRDDD AALDIVQDSM IRLAEKYADR PPAELPLLFQ
RILSNAMMDW FRRQKVRNAV VRNFSDFEPA DADGDFDLLE TLAAAGGATA VETAADSVSR
AQILLAIETE VARLPGRQRE AFLLRYWEEL DVAETAQSMG CSEGSVKTHC SRAVHSLAQA
LKARGVLP
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