| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2088 |
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| Symbol | |
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| ID | 4783667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 2236454 |
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| End bp | 2237815 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640090656 |
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| Product | putative ATP-dependent RNA helicase 1 |
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| Protein accession | YP_001021279 |
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| Protein GI | 124267275 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.936977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTCA AAGAACTGGG GCTCGCCGAG CCCCTGCTGC AAGCCATCGT CGACGCCGGC
TACGAGACGC CCACGCCGAT CCAGAAACAG GCCATTCCGG CCGTCATGCT GGGCGGCGAC
CTGCTCGCCG GCGCCCAGAC CGGCACCGGC AAGACCGCCG GCTTCGTGCT GCCGATGCTG
CACCGCCTGA TGGCCAGGCC GGCCGTCAAG GACGCTCGCG GCAAGAGCCC GGTGCGGGCG
CTGATCCTCA CGCCGACCCG CGAACTGGCG GCGCAGGTGG AGGAAAGCGT GCGCATCTAC
GGCAAGCACG CCAAGCTCAG CTCGATGGTG ATGTTCGGCG GCGTCGGCAT GCAGCCGCAG
ATCGACCGCC TCAAGCGCGG CGTCGACATC CTGGTGGCCA CGCCCGGCCG CCTGCTCGAC
CACCACCAGC AGCGCACGCT GGACCTGAGC CACGTCGAGA TCTTCGTGCT CGATGAAGCC
GACCGCATGC TCGACATGGG CTTCATCCAC GACATCAAGA AGGTGCTGGC GATCGTGCCG
AAGCAGAAGC AGAGCCTGCT GTTCAGCGCG ACCTTCAGCG ACGAGATCAA AACCCTGGCC
GACCGCCTGC TGAACAGCCC GCAGGTGATC GAGGTGGCGC GCCGCAACAG CACCGTCGAG
ACCATCGCGC AGAAGATCCA CCCGGTCGAC CGCGACAAGA AGAAGGAACT GCTGGCCCAC
CTGATCAAGA GCCAGGATTG GCACCAGGTG CTGGTGTTCT GCCGCATGAA GCACGGCGCC
AACCGCCTCA CCGAGTATCT GAACGACCAG CGCATCACCG CGATGGCGAT CCACGGCAAC
AAGAGCCAGA CCGCGCGCAC CAAGGCGCTG GCCGACTTCA AGAGCGGCGC GCTCCAGGTG
CTGGTGGCGA CCGACATCGC CGCGCGCGGC ATCGACATCG ACCAGTTGCC GCACGTCGTC
AATTTCGAGC TGCCCAACGT GTCCGAGGAC TACGTGCACC GTATCGGCCG CACCGGCCGC
GCCGGTGCCC TGGGCGAGGC CGTGTCGCTG GTCTGTGTCG ACGAGGACGG CTTCCTGCGC
GATATCGAGA AGCTGATCAA GCGCAGCATC CCGCGCGAGG TCGTGCCCGG CTTCGAGCCC
GATCCGCGTG CCGTGGCGCA GCCCATCCAG ATCGGACGGC AGACGCTCAA CGGCGGCCTG
CGCTCTGGTG GCGGCGGCCG GGGCGGCGCG GGTCGTCCGG CGGGCGGTGG CGGTGGCGGC
CGTGGGGGCC CCCGCAGTGC CGGCGGCGGC GCCCGCAGTG GCGGGGCCGG TGGCCCTCGC
GGCGGTGGCG GCCACGGCGG GGGCGGTGGC CGCAGTCGCT GA
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| Protein sequence | MSFKELGLAE PLLQAIVDAG YETPTPIQKQ AIPAVMLGGD LLAGAQTGTG KTAGFVLPML
HRLMARPAVK DARGKSPVRA LILTPTRELA AQVEESVRIY GKHAKLSSMV MFGGVGMQPQ
IDRLKRGVDI LVATPGRLLD HHQQRTLDLS HVEIFVLDEA DRMLDMGFIH DIKKVLAIVP
KQKQSLLFSA TFSDEIKTLA DRLLNSPQVI EVARRNSTVE TIAQKIHPVD RDKKKELLAH
LIKSQDWHQV LVFCRMKHGA NRLTEYLNDQ RITAMAIHGN KSQTARTKAL ADFKSGALQV
LVATDIAARG IDIDQLPHVV NFELPNVSED YVHRIGRTGR AGALGEAVSL VCVDEDGFLR
DIEKLIKRSI PREVVPGFEP DPRAVAQPIQ IGRQTLNGGL RSGGGGRGGA GRPAGGGGGG
RGGPRSAGGG ARSGGAGGPR GGGGHGGGGG RSR
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