Gene Mpe_A2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A2050 
Symbol 
ID4784627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp2192224 
End bp2192931 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content71% 
IMG OID640090620 
Productouter membrane protein 
Protein accessionYP_001021243 
Protein GI124267239 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA CCTCCTCCCG CAAGTCGATC CCCACGCTCT CGATCGTCGC GCTCACCGCG 
GCCGCGTTGC TGGCCAGCGG CTGCGCGAAC ATGAACCAGG AACAGCAGGA CACCGCCAAG
GGCGCCGGCA TCGGCGCGGC CGTCGGTGCG GTGGCCGGCG TGCTGATCGG CGACAGCAAG
AAGGGCGCGG CCACCGGCGC GGCGATCGGC GCGCTGGGCG GCGCGGTGGC CGGCAACGTG
TGGTCCAAGA AGATGGAAGA GAAGCGCCGT GCGATGGAGC AGTCCACGCA AGGCACCGGC
GTCGACGTGA CGCGCACCGC CGACAACCAG CTCAAGCTCA ACGTGCCGAG CGACATCTCC
TTCGACACCG GCAAGTCGGC CATCAAACCC GAGCTGCGCA CCGTGCTCGA CAGCTTCGCC
AACGGCCTAG CCAACGACCC GGCGCTGCAG GTGCGCGTGA TCGGCCACAC CGACAGCACC
GGCAGCGACG CGATCAACAA CCCGCTGTCG GTCGACCGCG CGCAGAGCGT GCGCGACTAT
CTCGCCGGCC GCGGCATCCT GCCGACACGC ATCGAGACCT CGGGCCGCGG CTCGCACGAG
CCGATCGCCG ACAACACCAG CGAGGCCGGC CGCGCGAAGA ACCGCCGCGT GGAGATCCTC
CTGCGCGAGC CGGAACAGGC CGGCGCACCG GCCGCCCCGA AGTCCTGA
 
Protein sequence
MTITSSRKSI PTLSIVALTA AALLASGCAN MNQEQQDTAK GAGIGAAVGA VAGVLIGDSK 
KGAATGAAIG ALGGAVAGNV WSKKMEEKRR AMEQSTQGTG VDVTRTADNQ LKLNVPSDIS
FDTGKSAIKP ELRTVLDSFA NGLANDPALQ VRVIGHTDST GSDAINNPLS VDRAQSVRDY
LAGRGILPTR IETSGRGSHE PIADNTSEAG RAKNRRVEIL LREPEQAGAP AAPKS