Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A2022 |
Symbol | |
ID | 4784242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 2163790 |
End bp | 2164719 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640090592 |
Product | tyrosine recombinase XerD subunit |
Protein accession | YP_001021215 |
Protein GI | 124267211 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCCG AGCCACACGA CGAACTGCCC CCGCTGCCCG CCGACAGTGC GGTCGCGATC GACGCCTTTC TCGAGGCGCT GTGGGTCGAG GACGGGCTGT CGGACAACAC CCTGGCCGCC TACCGGCGCG ACCTGACGCT GTATGCGCGC TGGCTGGTCC ACGCCAGCGG CAAGCCGCTC GACGGCAGCG GCGAGGCCGA CCTGCGCGCC TACGCGCTGG AGCGGCACGC CGGCACGCGT GCGACCAGCG CGAACCGTCG GCTCACCGTC TTCCGGCGCT ATTTCCGCTG GGCGCTGCGC GAGCATCGGC TGAGCGCCGA TCCGACCCTG AAGCTGCTGG CCGCGAAGCA GCCGCTGCGG GTGCCCAAGA CGCTGAGCGA GGCGCAGGTG GAGGCGTTGC TGGAGGCGCC GGACGTCGAC ACGCCGCTCG GCCTGCGCGA CCGGGCGATG CTGGAGATCC TGTACGCCAG CGGCCTGCGC GTCAGCGAGC TGGTCACGCT GAAGAGCGTG AACGTGGGCT ACTCGGAGGC GGCCCTGCGC GTCACCGGCA AGGGCAGCAA GGAGCGGCTG GTGCCGTTCG GCGAGGAGGC GCACGGCTGG CTGATGCGCT ACCTGGCGGA GGCGCGCGCG GCCATCCTGG GCGGCCAGGC GAGCGACGCG CTGTTCGTCA CCGCACGCGG CGGCCCGATG ACGCGGCAGG CGTTCTGGCA GCTGATCAAG CGGCATGCGG GCGCCGCCGG CATCCAGGTG CCACTGTCGC CGCACACGCT GCGGCATGCG TTCGCCACGC ACCTGCTCAA CCACGGCGCC GACCTGCGTG CGGTGCAGAT GCTGCTGGGC CATGCCGACA TCTCCACCAC GACCATCTAC ACGCACGTGG CGCGCGAGCG GCTCAAGCAG TTGCACTCAC AGCATCACCC GCGCGGCTGA
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Protein sequence | MSAEPHDELP PLPADSAVAI DAFLEALWVE DGLSDNTLAA YRRDLTLYAR WLVHASGKPL DGSGEADLRA YALERHAGTR ATSANRRLTV FRRYFRWALR EHRLSADPTL KLLAAKQPLR VPKTLSEAQV EALLEAPDVD TPLGLRDRAM LEILYASGLR VSELVTLKSV NVGYSEAALR VTGKGSKERL VPFGEEAHGW LMRYLAEARA AILGGQASDA LFVTARGGPM TRQAFWQLIK RHAGAAGIQV PLSPHTLRHA FATHLLNHGA DLRAVQMLLG HADISTTTIY THVARERLKQ LHSQHHPRG
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