Gene Mpe_A2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A2002 
Symbol 
ID4783789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp2145046 
End bp2145831 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID640090572 
Productcondensin subunit ScpB 
Protein accessionYP_001021195 
Protein GI124267191 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0508753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.414408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC AGGATGCAAA GCGCGTCCTC GAGACGGCGC TCATCTGCGC GCAGCAGCCG 
CTGCCGCTGC GCGAGTTGCG CACGCTGTTC GATGACCAAC TCGGCCCCGA CACCCTGCGC
GTCCTGCTCG ACGAGCTGGC GCGCGACTGG GAGGACCGCG GCGTCGAGCT CGTGGCGGTG
GCCAATGGCT GGCGTTTCCA GAGCCGTCCG GAGCTGCGTG AGTACCTCGA TCGCCTGCAC
CCCGAGAAGC CGCCGCGCTA CACCCGCGCG ACGCTCGAGA CGCTGGCAAT CATTGCCTAC
CGCCAGCCCG TGACGCGCGG CGACATCGAG GACATCCGCG GCGTCACCGT CAACAGCCAG
TTGCTCAAGC AGCTCGAGGA CCGCGGCTGG ATCGAGGCGA TCGGCCACCG CGAAACGCCG
GGGCGGCCGG CGCTGTTCGC GACGACGCGG CAGTTCCTCG ACGACCTCGG CCTCGCCACG
CTCGAGCAGT TGCCCGCCCT CGACGGCGCG CCAGCGGTGA CGATGCTCGT CGACGCCTTG
CCGGGCCAGG TATCGCTACT CGATGTCGCC ATCGATGCGG CCTTGCCGGG GGAGGGCGAT
CCCGGGCTTC CGCAGCAGGG CCTCGATGCC ATTCCGCCGG AGCCGCTCGA GGCTTCGGAC
GAAGCGGCCT CGGACGACGA CGAGGCTGTC GACGCAGCCA TCCCCATGGC TGCATCGGAG
GCTCTCTCCT CGACCGCAGA ACTTCCCACG CCGCCGGCCG ACGCCGGCAC GGAACCCCAG
ACATGA
 
Protein sequence
MNTQDAKRVL ETALICAQQP LPLRELRTLF DDQLGPDTLR VLLDELARDW EDRGVELVAV 
ANGWRFQSRP ELREYLDRLH PEKPPRYTRA TLETLAIIAY RQPVTRGDIE DIRGVTVNSQ
LLKQLEDRGW IEAIGHRETP GRPALFATTR QFLDDLGLAT LEQLPALDGA PAVTMLVDAL
PGQVSLLDVA IDAALPGEGD PGLPQQGLDA IPPEPLEASD EAASDDDEAV DAAIPMAASE
ALSSTAELPT PPADAGTEPQ T