Gene Mpe_A2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A2000 
Symbolndk 
ID4783787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp2142483 
End bp2142908 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content65% 
IMG OID640090570 
Productnucleoside diphosphate kinase 
Protein accessionYP_001021193 
Protein GI124267189 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.136751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCG AACGCACCTT GTCCATCATC AAGCCTGACG CCGTTGCCAA GAACGTGATC 
GGTCAGATCT ATGCCCGTTT CGAGGGCGCG GGCCTGAAGA TCGTGGCGGC CAAGCTGGTT
CACCTGTCGC GCGGCGAGGC CGAGCAGTTC TACGCCGTGC ACAAGGCCCG GCCTTTCTTC
AAGGACCTGG TCGAGTTCAT GATCTCGGGC CCGGTGATGA TCCAGGCGCT GGAAGGCGAG
GGCGCGATCG CCAAGAACCG CGAGCTGATG GGCGCGACGG ACCCGAAGAA GGCCGAGAAG
GGCACCATCC GTGCCGACTT CGCCGACAGC ATCGACGCCA ATGCCGTGCA CGGCTCGGAC
GCGCCGGAGA CCGCCGCGGT CGAGGTGGCG TTCTTCTTCC CGGGCATGAA CGTCTACAGC
CGCTGA
 
Protein sequence
MAIERTLSII KPDAVAKNVI GQIYARFEGA GLKIVAAKLV HLSRGEAEQF YAVHKARPFF 
KDLVEFMISG PVMIQALEGE GAIAKNRELM GATDPKKAEK GTIRADFADS IDANAVHGSD
APETAAVEVA FFFPGMNVYS R