| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1978 |
|---|
| Symbol | tsf |
|---|
| ID | 4784764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2117593 |
|---|
| End bp | 2118501 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640090548 |
|---|
| Product | elongation factor Ts |
|---|
| Protein accession | YP_001021171 |
|---|
| Protein GI | 124267167 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0264] Translation elongation factor Ts |
|---|
| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0299771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAA TCACCGCCAG CATGGTCGCC GAACTGCGCG CCAAGACCGA CGCCCCGATG
ATGGAGTGCA AGAAGGCCCT CACCGAGGCC GAAGGCGACC TGAACAAGGC CGAGGAACTG
TTGCGCGTCA AGCTCGGCAG CAAGGCCAGC AAGGCCGCCT CGCGCGTCAC GGCCGAAGGC
ATCGTCGTGG CGCACATCAG CGGCACGACC GGTGCGCTGA TGGAACTGAA CTGCGAAACC
GACTTCGTCT CCAAGAACGA CGACTTCCTG GCCTTCGGCA AGACGCTCGC GGAACTTGTG
GCCACCAAGG CCCCGGTGGA CGTCGCTGCG CTGTCGGCGC TGGAGATCGC CGGCGTGACG
GTGGAGGCCA CCCGCACCGC GCTGATCGGC AAGATCGGAG AGAACATCGC GATCCGCCGC
TTCAAGCGCT TCAGCGGTGA CAGCAAGCTG GTCAGCTACC TGCACGGCAC GCGCATCGGC
GTGGTCGTCG AGTACACGGG CGATGATGTC GCCGCGAAGG ACGTGGCGAT GCACGTGGCC
GCGATGAAGC CTGTGGCGCT GACCTCGGCC GACGTGCCGG CCGATCTGAT CGAGAAGGAG
CGCAACGTCG CCGCCGGCAA GGCCGCCGAG GATGCAAAGG CCGCCGAGGC GGCCGGCAAG
GCGCCGCAGT CTGCCGAGAT CGTCACCAAG CGGGTCGAGG GCTCGGTGCA GAAGTTTCTG
AAGGAAGTCT CGTTGTTCAA CCAGACCTTC GTGAAGAACG ACAAGCAGAC CGTCGAGCAG
ATGCTCAAGG CCGCCAGCAC GACGATCAAG GGCTTCACGA TGTACATCGT GGGTGAGGGC
ATCGAGAAGA AGACCGACGA CTTCGCCGCC GAAGTGGCCG CCCAGGTGGC CGCTGCCAAG
GGGCAGTAA
|
|---|
| Protein sequence | MPAITASMVA ELRAKTDAPM MECKKALTEA EGDLNKAEEL LRVKLGSKAS KAASRVTAEG
IVVAHISGTT GALMELNCET DFVSKNDDFL AFGKTLAELV ATKAPVDVAA LSALEIAGVT
VEATRTALIG KIGENIAIRR FKRFSGDSKL VSYLHGTRIG VVVEYTGDDV AAKDVAMHVA
AMKPVALTSA DVPADLIEKE RNVAAGKAAE DAKAAEAAGK APQSAEIVTK RVEGSVQKFL
KEVSLFNQTF VKNDKQTVEQ MLKAASTTIK GFTMYIVGEG IEKKTDDFAA EVAAQVAAAK
GQ
|
|---|
| |