| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1973 |
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| Symbol | |
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| ID | 4784759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2113394 |
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| End bp | 2114572 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640090543 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001021166 |
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| Protein GI | 124267162 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.193423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGC AACGCGTGTG CCTGCTCGGT GCCACCGGCT CGATCGGTGT CAGCACCCTC
GATGTGATCG CGCGCCATCC CGACCGCTAC GAGCTGTTCG CACTCAGCGC CCACAGCCGC
ATCGATGAAC TGGCGGCGCA GTGCCTGCAG TTCCGGCCGC GCTACGCGGT GTTGCCGGAC
GCCGCGGCAG CGCAGACGCT GCGCGAGCGG CTCGCGGGCA GCGGCGTCGA GGTGCTGTCC
GGCGCGGCCG CACTGGCCGA GGTGGCAGCG CACGCGGAGG TGGACACGGT GATGGCGGCG
ATCGTCGGCG CCGCCGGGCT GGCGCCCTGC CTGGCCGCCG CGCGCGCCGG CAAGCGCCTG
CTGCTGGCGA ACAAGGAGGC GCTGGTGGTG GGCGGTGCGC TGTTCATGGC GGCGGTGAAG
GAAGGCGGCG CCACGCTGCT GCCGATCGAC AGCGAGCACT CGGCCATCTT CCAGTGTCTG
CCGGAGGACC GCAGCACCTG GGCGCGGCGC ATCGATCACA TCGTGCTGAC GGCTTCGGGC
GGGCCGTTCC GCAGCCGCGA CCCGGCCAGC CTGAGCAACG TCACGCCCGA CGAGGCCTGC
GCCCATCCGA ACTGGGTCAT GGGCCGCAAG ATTTCGGTCG ACTCGGCGAC GATGATGAAC
AAGGCGCTCG AGGTGATCGA GGCTCGCTGG CTGTTCGACC TGCAACCCGA GCAGGTGCGT
GTCGTGCTGC ACCCTCAGAG CATCATCCAC TCGATGGTGG TATGCCGCGA TCATTCGGTG
CTGGCGCAGC TCGGAACGCC CGACATGCGG GTACCGATCG CCTACGGGCT GGCGTGGCCG
GAACGGATCG AGTCCGGAGC CGAGCAGCTC GACTTCATGC GGCTGGGGAC ACTCAGCTTC
GAGCCGGCCG ACGAGCGCCG CTACCCCGGG CTGCCACTGG CCTGGGCCGC CCTGCGCGGG
CCCGAGGGCG GTACGGCGGT GCTGAATGCC GCGAACGAAG TGGCCGTGGC GGCCTTCCTG
GCCGGAACGA TCCGCTTCGA CCAGATTCAC AGCGTCAATG CCCACACCTT CGAACGCACG
CCGCTTGGCT CCGGGGCCGC GGGCTCGCTC GCGGGCCTGC TCTCGCTCGA CGCCGAAGCC
CGCAGCGTTG CGCGCCAGCA CTTGAAAGCC CTGTCATGA
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| Protein sequence | MTMQRVCLLG ATGSIGVSTL DVIARHPDRY ELFALSAHSR IDELAAQCLQ FRPRYAVLPD
AAAAQTLRER LAGSGVEVLS GAAALAEVAA HAEVDTVMAA IVGAAGLAPC LAAARAGKRL
LLANKEALVV GGALFMAAVK EGGATLLPID SEHSAIFQCL PEDRSTWARR IDHIVLTASG
GPFRSRDPAS LSNVTPDEAC AHPNWVMGRK ISVDSATMMN KALEVIEARW LFDLQPEQVR
VVLHPQSIIH SMVVCRDHSV LAQLGTPDMR VPIAYGLAWP ERIESGAEQL DFMRLGTLSF
EPADERRYPG LPLAWAALRG PEGGTAVLNA ANEVAVAAFL AGTIRFDQIH SVNAHTFERT
PLGSGAAGSL AGLLSLDAEA RSVARQHLKA LS
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