| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1972 |
|---|
| Symbol | |
|---|
| ID | 4784758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2112036 |
|---|
| End bp | 2113397 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640090542 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001021165 |
|---|
| Protein GI | 124267161 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.31127 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCT TGCTGGCCTT CCTGCTGACG CTCGCCATCC TGATCGTCGT GCACGAGTAC
GGGCACTACC GGGTCGCCGT GGCCTGTGGC GTGAAGGTGC TGCGCTTCTC GGTCGGCTTC
GGTCGGGTCG TTTGGCGCCG CCAGCGGGGG GAGACCGAGT TCGTCGTCTC GATGCTGCCC
CTGGGCGGTT ACGTGAAGAT GCTCGACGAG CGTGAGGGTT CGGTGCCCGC TGCCGAACGC
GCTCGGGCCT ACAACAACCG ACCGCTGTGG CAGCGATCGA GCATCGTGGC GGCCGGCCCG
GCCGCCAATC TGCTGCTCGC GGTGCTGCTG TACGCCGCGG CCAACTGGGT CGGGCTGGAG
GAACCCAAGG CCGTCCTCGG CGCGCCGACG GTCGGCAGCA TTGCCGATCG CGCGGGCCTG
GCGGCGGGCG ACTGGGTGCG GGGCGTCGTG CAGGACGACG GCGGTAACGA GCCGGTGCAG
TCGATGACCG ATCTGCGCTG GCAACTGACC GACGCCGCCT TGCGCGGCGA ACGCATCGCG
CTGCGCATCA CCGACGCCCA GGGGCACGGC GAGCGCACGG TGCGCCTGGC ACTCGAGGGC
GTGAACGCGC GAGAGGTCGA TGCCGAGCTG ATGCGCCGCA TCGGCATCGG CACGCCGTTC
AGCGAGCCGG TGCTCGGCAA GCTGGTCGAG GGCGGACCCG CCGCGCGGGC CGGGCTGCGT
GAAGGCGACC GCGTGCTGGG CGTCGATGGC GCCCGCATCG ACGATGCCGG ACGGCTGCGC
GAGACGATCC GTGCGGCCGT GCGCGACGGC GTGCCGGTCC CGATGGCGTG GGAGGTACAG
CGCGGCAGCG AGCGGCTATC GCTGACCGTG ATGCCGGGGC TGCTGACCGA CGGCGCCCGC
AGCGTGGGCC GGATCGAGGC CTACGTGGGG CAGGCGCCGG AGATGGTCAC GGTGCGCTAC
GGCGTGGTCG ATGGCTTGGT GCGCGGTGCC CAACGCACCT GGGAAGTGGC GGCACTGAGC
CTGCGCATGC TGGGCAAGAT GCTGATCGGC GAGGCCTCGC TGAAGAATCT GAGCGGGCCG
CTGACGATCG CCGACTACGC CGGCCAGTCG GCACAACTCG GGCTGGCCTA CTACCTCGGC
TTCCTCGCAC TGGTGAGTGT CAGCCTCGGC GTGCTCAATC TGCTGCCGTT GCCGATGCTC
GACGGCGGAC ACCTCATGTA TCATCTTTTC GAAGGAGTGA CAGGGCGGCC GGTCTCTGAG
GTGTGGCTCG ATCGGCTGCA GCGCGGGGGG CTGGCAATCA TGCTCGTGAT GATGTCACTC
GCCCTCTACA ACGACGTGGC CCGCCTGCTG GGCCTGCATT GA
|
|---|
| Protein sequence | MTTLLAFLLT LAILIVVHEY GHYRVAVACG VKVLRFSVGF GRVVWRRQRG ETEFVVSMLP
LGGYVKMLDE REGSVPAAER ARAYNNRPLW QRSSIVAAGP AANLLLAVLL YAAANWVGLE
EPKAVLGAPT VGSIADRAGL AAGDWVRGVV QDDGGNEPVQ SMTDLRWQLT DAALRGERIA
LRITDAQGHG ERTVRLALEG VNAREVDAEL MRRIGIGTPF SEPVLGKLVE GGPAARAGLR
EGDRVLGVDG ARIDDAGRLR ETIRAAVRDG VPVPMAWEVQ RGSERLSLTV MPGLLTDGAR
SVGRIEAYVG QAPEMVTVRY GVVDGLVRGA QRTWEVAALS LRMLGKMLIG EASLKNLSGP
LTIADYAGQS AQLGLAYYLG FLALVSVSLG VLNLLPLPML DGGHLMYHLF EGVTGRPVSE
VWLDRLQRGG LAIMLVMMSL ALYNDVARLL GLH
|
|---|
| |