| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1971 |
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| Symbol | |
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| ID | 4784757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2109686 |
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| End bp | 2112031 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640090541 |
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| Product | putative outer membrane signal peptide protein |
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| Protein accession | YP_001021164 |
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| Protein GI | 124267160 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.208049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.130084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTCT CCCGCGCGCT CCTCCTGTCG ACGGTCCGTC CGTCGCTCTC CTTGGCCACC
CCTTCCGCGT TGCGCCCCTC GATTCTCGCC GCCGCCCTGG CGGTGGCAAT GCACGCGGCG
CCGGTGTGGG CGGTCGAGCC CTTCGTGCTC AAGGACATCC GTGTCGAAGG CCTCCAGCGG
GCCGACGCCG GTACCATTTT CGGCGCGCTG CCGTTCCGTA TCGGCGACAC CTACAGCGAC
GAGAAGGGCG CCGCCGCGCT GCGCGCGCTG TTCGCCACCG GCCTGTTCAA GGACGTGCGA
CTGGACGTCG ACAATGACGT GGTCGTCGTC ATCGTCGAGG AGCGGCCGAT CATCTCGTCG
GTGACCTTCG TCGGGCTCAA GGAGTTCGAC AAGGACGCGC TCACCAAGTC GCTGAAGGAT
GTGGGCATCG GCGAAGGCCA GCCGTTCGAC CGCGCGCTGG CCGACCGTGC CGAACAGGAA
CTCAAGCGCC AGTACCTCAC GCGCAGCCTC TACGGCGCCG AGGTCGTGAC CACCATCACT
CCGGTGGAGC GCAACCGCGT CAACGTCACC TTCACCGTCA GCGAAGGTGA GGTCGCGAAG
ATCAGCGACA TCCGCATCAC CGGCAACAAG GTGTTCTCGG AAAGCACGCT GCTCGGGCAG
TTCGAGCTGA CCACCGGCGG TTGGCTCACT TGGTACACGA AGACGGATCG CTACTCGCGT
ACCAAGCTCA ATGCCGACCT CGAAACGCTG CGCGCCTATT ACCTGAACCG CGGCTATCTC
GAGTTCACGG TCGACTCCAC GCAGGTGGCC ATCTCACCGG ACAAGCAGAA CATTTCGATC
ACGATCAACG TGACCGAAGG TCAGCCCTAC ACCGTGACAG CGGTCCGCCT CGAGGGTGAG
TACCTCGGCA AGGAAGACGA CTTCAAGGCG CTGGTGGCCA TCAAGCCGGG CGAGGCGTAC
CGCGCCGAGA CAGTCGCCGA GACGACCCGC CGCTTCACCG AGATGTACGG CGCCTTCGGC
TACGCCTTTG CACGCGTCGA GCCGCGTACC GAGATCGACC GTGCCACCGG GCGCGTCGAG
GTGGTGCTGG TCGGCGAGCC GAGCCGCCGG GTCTATGTGC GCCGCGTGAA CGTGGCAGGC
AATACCCGCA CCCGCGACGA GGTGGTGCGG CGCGAATTCC GGCAGTTCGA GTCGTCCTGG
TACGACGGCC GGCGCATCAA GCTGTCGCGC GACCGCGTGG ACCGGCTCGG CTACTTCAGC
GAGGTCACGA TCGACACGGC CGAGGTACCG GGTGCGCAGG ACCAGGTCGA CATCACCGCC
CAGGTGGTCG AGAAGCCGAC CGGCAATCTG CAGCTGGGCG CCGGCTTCTC CAGCGCGGAG
AAGGTCTCGC TGACTTTCGG CATCCGACAG GACAACATCT TCGGCAGCGG CAACTACCTG
GGCTTCGAGG TCAACACCAG CCGCTACAAC CGCAACATCG TGGTCAGCAC GGTCGATCCG
TACTTCACGG TCGACGGCAT CTCGCGCGCC ATCGACGTGT TCTACCGAAC GGCCAGGCCG
ATCAACAGCC AGGGCGAGGA CTACAAGCTG GTGACGCAGG GCGGGGCGAT CCGTTTCGGC
GTGCCGTTCA GCGAGTTCGA CACCGTGTTC TTCGGTGCGG GCTGGGAGCG GACCCAGATC
GAGGCCGGTG TCTCGATCCC GAACAGCTAT TTCCTGTACC GCGAGGCCTT CGGTGACACG
ACCGACAGCC TGCCGCTGAC GCTCGGTTGG CAGCGCGACG GCCGCGACAG CGCGCTGGTC
CCCACCTCCG GTCTCTACCA GCGGCTGAAC GCCGAGTGGA GCGTGGCGCT CGACACCCGG
TATCTGCGCA CCAACTACCA GATTCAGCAG TGGATTCCGC TGTCGAAGAA GTACACGCTG
GGCCTCAATG CCGAAGCCGG CTGGGGCAAG GGCTTCGGCG GCCGTCCGTA TCCGATCTTC
AAGAACTTCT ACGGCGGTGG CCTCGGGTCG GTGCGGGGCT TCGACCAGAG CTCGCTGGGC
CCGATCGACG TGACCGGCGC CTACATCGGC GGCAACCGCA AGCTCAACCT GAATGCCGAG
TTCTACGTCC CGGTGCCGGG CTCGGGCAAC GACCGCACGC TGCGCCTGTT CGGCTATCTC
GACGCCGGCA ACGTGTGGGG CGAGGACGAG AAGCTCAGCC TCGGCGACCT GCGTGCCGCG
GCCGGCATCG GCCTGAGTTG GGTCTCGCCG GTCGGGCCGC TCAAGATCAG CTACGGCCAG
CCGGTGCGCA AGTTTGCGCA GGATAGAATT CAAAAGTTGC AATTCCAGAT CGGGACCGCG
TTCTGA
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| Protein sequence | MAFSRALLLS TVRPSLSLAT PSALRPSILA AALAVAMHAA PVWAVEPFVL KDIRVEGLQR
ADAGTIFGAL PFRIGDTYSD EKGAAALRAL FATGLFKDVR LDVDNDVVVV IVEERPIISS
VTFVGLKEFD KDALTKSLKD VGIGEGQPFD RALADRAEQE LKRQYLTRSL YGAEVVTTIT
PVERNRVNVT FTVSEGEVAK ISDIRITGNK VFSESTLLGQ FELTTGGWLT WYTKTDRYSR
TKLNADLETL RAYYLNRGYL EFTVDSTQVA ISPDKQNISI TINVTEGQPY TVTAVRLEGE
YLGKEDDFKA LVAIKPGEAY RAETVAETTR RFTEMYGAFG YAFARVEPRT EIDRATGRVE
VVLVGEPSRR VYVRRVNVAG NTRTRDEVVR REFRQFESSW YDGRRIKLSR DRVDRLGYFS
EVTIDTAEVP GAQDQVDITA QVVEKPTGNL QLGAGFSSAE KVSLTFGIRQ DNIFGSGNYL
GFEVNTSRYN RNIVVSTVDP YFTVDGISRA IDVFYRTARP INSQGEDYKL VTQGGAIRFG
VPFSEFDTVF FGAGWERTQI EAGVSIPNSY FLYREAFGDT TDSLPLTLGW QRDGRDSALV
PTSGLYQRLN AEWSVALDTR YLRTNYQIQQ WIPLSKKYTL GLNAEAGWGK GFGGRPYPIF
KNFYGGGLGS VRGFDQSSLG PIDVTGAYIG GNRKLNLNAE FYVPVPGSGN DRTLRLFGYL
DAGNVWGEDE KLSLGDLRAA AGIGLSWVSP VGPLKISYGQ PVRKFAQDRI QKLQFQIGTA
F
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