| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1948 |
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| Symbol | |
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| ID | 4786709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2084266 |
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| End bp | 2086179 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640090518 |
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| Product | hypothetical protein |
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| Protein accession | YP_001021141 |
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| Protein GI | 124267137 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.461201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.145014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTGATCGGTG TGAGCCTGTG CGCGTTGGCA CAGGGTGTCG TGGCTGTCGG TTTCGGAAAA
TTGCCGGACT CCACGACGCT CGGGCAGCCG CTGGAACTGA AGATTCCGCT GCGGGTCGAC
GCGGGCGAGG ATCTGCGTCC CGAATGCCTC AATGGCGAAG TCCATTTCTC CGACAACCTG
CAGCAGCCCG GCACCACCTC GCTGCGGCTC GAACCCGCCG AACCCAGCGC AACCGAGCGC
GTGCTGCGGC TTGCCACCAC CACGCGCGTC GACGAGCCGG TCGTGACGGT GCAGATCACG
GTCGGATGTG CCTCCAAGGT CACACGCCGC TTCACGCTGT TCGCGGACCC GCCGCTGATC
GCCCCCGCCG AAGTGGCCGC CCCAGTTGCG GCCGTTGCAC CGTCGGCACC ACCTGCGCCG
GCGGCCTCCG CAGCGAGCCG CCCCGAAGCC GCGCCCCCGG ATACCGCGCC GATGCCGCGT
GCCGCCACAC CGCGCACGCC GGCGCGCAGC CGTGCCACCA CGGCCGCACC ACGCCGTGCG
CCCGCCACTG CCGCTGCCCC AATCGCTGTG CCGCGCCCCG CGCCGCAGCG TGCGGCCCGG
CCCGCGGCGA CCGGCAACAA CGCCCGTTTG AAGCTCGCCC CTCTCGAGGC GGGCGCCCTG
GTCGCGGCGA CGCCAACGCC CGCCGAGGTG GCCGCCAGCG CGGCCGCCGC CGAGCAGGCG
GCCAGCGCCG CCAGTGCGGC AGCCCTGGCC GAGGCCGCCC GGGTCAGAGT CGAGGAACTC
GAGGCGGCGA TGAACAAGCT GCGCCTCGAG ACCGCAACCA CCCAGCAGGC CATTGCCGGC
CTGCAGGCGC GGTTGCAGCG CGCGGAAAGC GATCGCTACA GCAACCCATT GGTCTACGGT
CTGGCGGCGG CCCTCGCGGT TCTGCTCGGC GTGGTGATCT GGCTCTGGCG GCAACGCAAC
CAGGAGCGCC AGTCGCACGC CTGGCTGGTG CAGGCGGCCA CGCCGGCGGA AGCGCCGCGG
AGCGGTGGCG TGGGAGCGCC GGCCGCAACG GCAGAGGCGG CCGCCTTCGC GCCGGTGCCG
ACGCTCAAGG CCTGGGTCAG CAAGCCCAAC GAGATTGACG GTTTCGACGA CACGCTGGCC
GCGACGCGGG CCGGCAGCAT GTCGGTGACC GGCGCGCTGT CGGAGCCTGC TCCGCTGAAT
GCGGTGCGGC CGCTCAGCGC TGCGCAGAAG CGCGAGGTTT CGGTCGAGGA GCTGATCGAC
CTCGAGCAAC AGGCCGAGTT CTTCATCGTC CTGGGTCAGG ACGCTGCGGC GATCGATCTG
CTGATGGGGC ATCTGCGCAG CACGTCAGGT ACCAGTCCGC TGCCCTATCT GAAGCTGCTG
GAAATCTACA AGCGCCGCGG TGACCGTAGC GACTACGAAC GGCTGCGCGA GCGCTTCAAC
AGCCGCTTCA ATGCCTACGC CCCGGCCTGG GAGACCGACC TTCTGGGCGG ACGCACGCTG
GAAGACTACC CGGCCGTCAT CGAGCAGCTC CAGGCGCTGT GGTCGACGCC GTCGCGAGCG
ATGGACGTGT TGCAGGTCAG CCTGCTGCGC CCCGACGATG GCAATGCCGA TCCCGAGGGC
AGCGACAGCT TCGACCTGCC GGCCTATCGC GAGCTGATGC TGCTGTATTC GGTCGCACGC
GATCGATCGG AGCTCGAGGC CGGCGGGGCC GTCGACCTGC TCCTGCCGAT CGGCGCAGGC
GAACCCACGG ACGATGCGCC GGCCAGCGCG GTCTTCGAGC GTCTGCTGGC GACGACCTCG
CTCGAGGCCC AGCCGGAGGT GCAGAAGCCG CTGGCGGTCG ATCTGTCGCT CGAGGACCTC
GAGCCCAAGC CGGCCGAAGG CGGCACAGGC CAGGACGGCG GTTCGCGCGG CTGA
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| Protein sequence | MIGVSLCALA QGVVAVGFGK LPDSTTLGQP LELKIPLRVD AGEDLRPECL NGEVHFSDNL
QQPGTTSLRL EPAEPSATER VLRLATTTRV DEPVVTVQIT VGCASKVTRR FTLFADPPLI
APAEVAAPVA AVAPSAPPAP AASAASRPEA APPDTAPMPR AATPRTPARS RATTAAPRRA
PATAAAPIAV PRPAPQRAAR PAATGNNARL KLAPLEAGAL VAATPTPAEV AASAAAAEQA
ASAASAAALA EAARVRVEEL EAAMNKLRLE TATTQQAIAG LQARLQRAES DRYSNPLVYG
LAAALAVLLG VVIWLWRQRN QERQSHAWLV QAATPAEAPR SGGVGAPAAT AEAAAFAPVP
TLKAWVSKPN EIDGFDDTLA ATRAGSMSVT GALSEPAPLN AVRPLSAAQK REVSVEELID
LEQQAEFFIV LGQDAAAIDL LMGHLRSTSG TSPLPYLKLL EIYKRRGDRS DYERLRERFN
SRFNAYAPAW ETDLLGGRTL EDYPAVIEQL QALWSTPSRA MDVLQVSLLR PDDGNADPEG
SDSFDLPAYR ELMLLYSVAR DRSELEAGGA VDLLLPIGAG EPTDDAPASA VFERLLATTS
LEAQPEVQKP LAVDLSLEDL EPKPAEGGTG QDGGSRG
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