| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1923 |
|---|
| Symbol | |
|---|
| ID | 4786684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2063207 |
|---|
| End bp | 2063740 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640090493 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001021116 |
|---|
| Protein GI | 124267112 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0779] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0156529 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTGGC AGGCAGCCGT TGAGAAAACC GTGACCGGAT TCGGTTATGA GTTGGTGGAA
TGCGAGCGGG GCTCGCAGGG GTTGCTGCGC GTGTTCATCG ACCGGGTGCC GGGACAGGTC
TACGACGGTG GTCCGGGGGA ATTCGTGACG GTCGAGGACT GCGAGAAGGT GACCCGCCAA
TTGCAGTATG TGCTGGAGGT CGAGAACTGC GATTACTCGC GGCTCGAGGT CTCCTCGCCC
GGCCTGGACC GTCCGCTGAA GAAGTCGGCC GACTACGCCC GCTTCGCCGG TGAGCGGATC
GACATCACGC TGAAGCTGCC GTTCCAGGGC CGCAAAAAGT ACCAGGGCGT GCTCGCGGCG
TCCGGCGAGG CGTGGGAACT GCATTTCAAC GACGGCAAGC AGGATCAGGT CTTGGGATTC
ACGCTCGAGG AAGTTCGCGA CGCCCGGCTC GTGCCGGTCG TGGACTTCAA GGGCCGCAAG
GGCAAGGAGC CAGCCGAGCC CGCGGCGCAG GTACCCGGAG GTTACGAACA ATGA
|
|---|
| Protein sequence | MSWQAAVEKT VTGFGYELVE CERGSQGLLR VFIDRVPGQV YDGGPGEFVT VEDCEKVTRQ
LQYVLEVENC DYSRLEVSSP GLDRPLKKSA DYARFAGERI DITLKLPFQG RKKYQGVLAA
SGEAWELHFN DGKQDQVLGF TLEEVRDARL VPVVDFKGRK GKEPAEPAAQ VPGGYEQ
|
|---|
| |