| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1922 |
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| Symbol | |
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| ID | 4786683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2061732 |
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| End bp | 2063210 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640090492 |
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| Product | NusA antitermination factor |
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| Protein accession | YP_001021115 |
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| Protein GI | 124267111 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0208405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCG ATCTGTTGGA CTTTGTGGAT GCGATCGCTC GCGAGAAGAG CGTCGAGCGT
GATGTCGTGT TCGAGGCCGT CGAGGCGGCG CTCGCCTCGG CGAGCAAGAA ACTGCATGGC
GGCGAGGTCG ACATCCGCGT ATCGGTCGAC CGCGACACGG GCGAGTACGA AACGTTTCGC
CGCTGGCTCG TCGTGCCCGA CAGCGCCGGC CTGCAGAACG CCGACGCCGA GGAACTGCTG
ACCGATGCCC GCGACCGCAT CGAAGACATC GAGGAAGGCG ACTACATCGA GGAAGCCATC
GAGTCGGTGT CGATCGGGCG CATCGGTGCG CAGGCCGCCA AGCAGGTGAT CCTGCAGAAG
GTGCGCGACG CCGAGCGCGA GCAGTTGCTC AATGACTTCC TGTCGCGCGG CGACAAGATC
TTCGTCGGCA CCGTCAAGCG CCTCGACAAG GGCGACCTCG TCGTCGAGAG CGGCCGGGTC
GAGGGGCGTC TGAAGCGAAG TGAGCTGATT GCCAAGGAAA ACCTCCGCAC CGGCGACCGC
GTTCGCGCCT ACATCACGGA AGTGGACACC ACGCAACGCG GGCCGCAGAT CATGCTGTCG
CGCAGCGCAC CTGGCTTCAT GGTGGAACTG TTCCGCCACG AGGTTCCGGA GATCGAGCAG
GGCCTGCTCG AGATCAAAAG CTGCGCCCGA GATGCAGGTT CGCGCGCCAA GATCGCCGTG
CTGTCGCACG ACAAGCGGGT CGACCCGATC GGCACCTGCG TGGGTGTGCG CGGCTCGCGC
GTCAATGCCG TCACCAACGA ACTGGCTGGC GAGCGTGTCG ACATCGTGCT GTGGTCGGCC
GATCCGGCGC AGTTCGTGAT CGGCGCGTTG GCGCCGGCCA ATGTGCAGTC GATCGTGGTC
GACGAGGAAA AGCATGCGAT GGACGTGGTG GTCGACGAGG AGAACCTCGC CATCGCCATC
GGCCGCGGCG GCCAGAATGT GCGCCTCGCT TCTGAGCTGA CCGGCTGGCG CATCAACATC
ATGAGCGCCG AGGAGTCGCA GGACAAGCAG GCGACCGAAT CGGAGTCGAT CCGCAAGCTG
TTTGTCGAGA AGCTCGACGT CGATGCCGAG GTGGCCGACA TCCTGATCGC CGAGGGCTTC
ACCAGCCTCG AGGAAGTGGC CTACGTGCCG CTGCAGGAAA TGCTGGAGAT GGAGTCCTTC
GATGAGGACA CCGTCCACGA GTTGCGCACG CGGGCCAAGG ACGCACTGCT GACGATGGAG
ATCGCCCAGG AAGAGAAGCT CGAAAGCGTT TCGCAGGATC TGCGCGACCT CGAGGGGCTC
GACGCCGAGC TGATCGCCAG GCTGGCCGAA GGCGGCATCC ACACGCGCGA CGACCTGGCC
GATCTCGCGG TCGACGAACT GACCGAGCTG ACCGGCGTGG CCGACGAGCA GGCGAAGGCC
CTGATCATGA AGGCGCGCGA GCACTGGTTC ACTGCCTGA
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| Protein sequence | MNRDLLDFVD AIAREKSVER DVVFEAVEAA LASASKKLHG GEVDIRVSVD RDTGEYETFR
RWLVVPDSAG LQNADAEELL TDARDRIEDI EEGDYIEEAI ESVSIGRIGA QAAKQVILQK
VRDAEREQLL NDFLSRGDKI FVGTVKRLDK GDLVVESGRV EGRLKRSELI AKENLRTGDR
VRAYITEVDT TQRGPQIMLS RSAPGFMVEL FRHEVPEIEQ GLLEIKSCAR DAGSRAKIAV
LSHDKRVDPI GTCVGVRGSR VNAVTNELAG ERVDIVLWSA DPAQFVIGAL APANVQSIVV
DEEKHAMDVV VDEENLAIAI GRGGQNVRLA SELTGWRINI MSAEESQDKQ ATESESIRKL
FVEKLDVDAE VADILIAEGF TSLEEVAYVP LQEMLEMESF DEDTVHELRT RAKDALLTME
IAQEEKLESV SQDLRDLEGL DAELIARLAE GGIHTRDDLA DLAVDELTEL TGVADEQAKA
LIMKAREHWF TA
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