| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1919 |
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| Symbol | |
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| ID | 4786740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2057312 |
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| End bp | 2058349 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640090489 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_001021112 |
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| Protein GI | 124267108 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.15659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0760202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCGG TTGCGCTGAA CCGTCCGCCC CGCCGCGTGC CGCAAGCCGT GCGCGAGCCG
CGTGCACCGC GCCGTGCACT GCACGGCGTG CTGCTGCTCG ACAAGCCGCT GGGCTGGTCG
AGCAACGATG CGCTGCAGAA GGTCAAGGGC ATGCTGCGCG CCGAGAAGGG GGGGCACACC
GGCACCCTCG ATCCGCTGGC GACGGGCCTG CTGCCGCTGT GCTTCGGCGC GGCCACCAAG
TTTTCGCAGG CCAGCCTGGA TGCCGACAAG ACCTACCGTG CGACGCTGAA GCTCGGCGTC
ACGCGCATCG GTGGCGACGG CGAGGGCGAG GTGATCGAGA CGCGCCCGGT GTCCTTCGAC
GATGCGGCGC TGCGCGCCGC CTGCGCCGCC CTGACCGGCG AGACGATGCA GCTGCCACCG
ATGCATTCGG CGCTCAAGCG CGAGGGCAAG GCGCTCTACG AATACGCGCG CGCCGGCGTC
GAGGTCGAAC GCACCCCGCG GCGAGTCGTG ATTCATCGGC TGGACATCCT GCGCTGGCAC
GCTGACGAGC TCGACATCGA GGTCTGCGTC AGCAAGGGCA CCTACATCCG TACACTCGCC
GAAGACCTGG GCCGTGCGCT CGGCTGCGGC GCCCACCTGA GCGCGCTGCG CCGGGTGGCC
AGCGGACCGG TGCAACTGGA CGGCGCGATC ACCATCGACG CGCTGCAGGC GCTCGATCCC
GTGCTGCGCG AGCAGCGCCT GTTGCCGCCC GACGTGCTGG TGGCCGACTG GCCTGCCGTG
CGGTTGACGG CTGACGACGC CGGCCGCTTC CTGTCCGGCC TGCGTCGCCG CGTCGAGGCT
GTGGATTGCG CCGCGGTGCG GGTGTACGGC CCCGAGCCGC GTGCCTTCCT CGGCAGCGCC
CACGTGAAGG CCGGAGAACT GATCCCCGAC CGGCTGCTGA GCCCGCCTGA AGTGCAGGCG
CTGATCGACG CCAGCCCTGC CGCCGACACC GCGACCGCTG CGCCCCTTAC CGAATCCAAG
CAAGTGAGCA TGACATGA
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| Protein sequence | MNPVALNRPP RRVPQAVREP RAPRRALHGV LLLDKPLGWS SNDALQKVKG MLRAEKGGHT
GTLDPLATGL LPLCFGAATK FSQASLDADK TYRATLKLGV TRIGGDGEGE VIETRPVSFD
DAALRAACAA LTGETMQLPP MHSALKREGK ALYEYARAGV EVERTPRRVV IHRLDILRWH
ADELDIEVCV SKGTYIRTLA EDLGRALGCG AHLSALRRVA SGPVQLDGAI TIDALQALDP
VLREQRLLPP DVLVADWPAV RLTADDAGRF LSGLRRRVEA VDCAAVRVYG PEPRAFLGSA
HVKAGELIPD RLLSPPEVQA LIDASPAADT ATAAPLTESK QVSMT
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