| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1916 |
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| Symbol | |
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| ID | 4786737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2053456 |
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| End bp | 2054514 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640090486 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_001021109 |
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| Protein GI | 124267105 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.648833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.218347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGCTC TGAGCCTTGC ACCTCATCCT TCTGGCAGTT CAGTGGAACG AGACCTCACT
TCGGATCGGC AGTGGAATCC GTGGCGCCTG TCGGTCGCGC CGATGATGGA CTGGACCGAT
CGACATTGCC GTCACTTCCA TCGCCTGCTC TCGCGCCACA CCCGGCTCTA TACCGAGATG
GTCACCACCG GAGCCCTGTT GCACGGCGAT GTGCCGAGGC ATCTGGACTT CGGCCCCGAG
GAGCACCCGG TGGCGCTGCA GCTGGGCGGC AGCGAGCCGG AGGATCTGGC CGCCTGCGCG
AAGCTCGGCG AGCGCTGGGG CTACGACGAG ATCAACCTCA ATTGCGGCTG TCCCAGCGAG
CGTGTGCAAC GTGGCGCCTT CGGCGCCTGC CTGATGGCCG AGCCCGACCT GGTGGCCGAC
GGCGTGAAGG CGATGCGTGA CGCGGTGGGC ATCCCGGTGA CCGTGAAGCA CCGCATCGGC
ATTGACCGGA CCGAGAGCTA CGGGTTCGTG CGCGATTTCA TCGGCACCGT GGCAGCGGCC
GGCTGCGAGG TGTTCATCGT CCACGCACGC AATGCCTGGC TCAAGGGCCT CAGCCCGAAG
GAGAACCGCG AACTGCCACC GCTGCGCCAC GAGTGGGTCT ACCGCCTCAA GCGCGATTTC
CCGGCCTTGA CGATCGTGCT GAACGGCGGC GTCAAGACCC ACGACGAGAT CGCCACGCAC
CTGGCGCAGG TCGATGGCGT GATGCTCGGG CGTGAGGCCT ACCACCATCC CTGGCTGATG
GCTGATTGGG ATGTGCGCTT CTTCGGCGAC GCGCCACTCG AGCGAGACCG TGCCGACATC
GAGGCGGCGA TGGTGCGCTA CATGGAGCTT CAGCGGCTGC AGGGCGAGCC CTGGTCGCGC
GTATCGCGCC ACATGCTCGG CCTGTGGAGC GGTATGTCCG GCGCCCGGCG CTGGCGGCAG
GTCTGGTCGG ATCATCGGCT CAAGAACGAG CCGCCGGAGG TGGTGTCGGC GCTGGCGCGC
CGCCGGCCGA CGGTGGACGA GGTCGCGGCG GCGGCTTGA
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| Protein sequence | MLALSLAPHP SGSSVERDLT SDRQWNPWRL SVAPMMDWTD RHCRHFHRLL SRHTRLYTEM
VTTGALLHGD VPRHLDFGPE EHPVALQLGG SEPEDLAACA KLGERWGYDE INLNCGCPSE
RVQRGAFGAC LMAEPDLVAD GVKAMRDAVG IPVTVKHRIG IDRTESYGFV RDFIGTVAAA
GCEVFIVHAR NAWLKGLSPK ENRELPPLRH EWVYRLKRDF PALTIVLNGG VKTHDEIATH
LAQVDGVMLG REAYHHPWLM ADWDVRFFGD APLERDRADI EAAMVRYMEL QRLQGEPWSR
VSRHMLGLWS GMSGARRWRQ VWSDHRLKNE PPEVVSALAR RRPTVDEVAA AA
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