| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1890 |
|---|
| Symbol | |
|---|
| ID | 4786711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 2025238 |
|---|
| End bp | 2026185 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640090460 |
|---|
| Product | agmatinase |
|---|
| Protein accession | YP_001021083 |
|---|
| Protein GI | 124267079 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
|---|
| TIGRFAM ID | [TIGR01230] agmatinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0474276 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCGG CCATGACTTC CTTCGCCTTC CTCTCCGGCA GCAGCTTCCT GAAGCTTCCA
TCACAAGCCG ATCGGCCCTA TGCCATCGCC GGCCTCGCGT GGGATGGCGC GGTCACCAAC
CGACCGGGCG CTCGCTTCGG TCCGCGCGCC ATCCGCGAAG CAAGCCACAT GCTGTGCGAC
GGCATCCATC CGCACTTCAA CATCGACCCC GCGCCCTACC TGACCGACCT CGGTGACCTG
CCGCTGCCCA ACACCAGCCT CGAAGCCATG CGCGTGGCCA TGGCGCCGAG CGTGAACGCG
ATGATCCGCG CCCACCACAT GGCCTGGATC GGCGGCGATC ACTCGGTCAC GCTGCCACTT
CTGCGGGCCT ACAAGTCCTG GCTCGGCCGA CCGCTGGCGG TGATCCATTT CGATGCCCAC
TGCGACACCT GGGAAGACCA CTTCGGCGAG CCCAGCGGCC ATGGAACGTG GGTCTACGAG
GCCCTCCAGG AGGGCCTGGT GCTGCCCGAA TGCTTCACCC AGATCGGCAT CCGCTCGGCG
GGCGCACGCG AGGCACGCGA CTATGTGCGG ACCCGGGGCG GACAGATCTT CGACGCGCGG
CAACTGCGTG GCCTCGAGAG CCCGGCGCAG CTGGCGCCCG TGACCACCGC GATTCGGAAG
CGGCTCGCCG CCCACGGCAA CCCGCCGCTC TACCTCAGCC TCGACATCGA TTGCCTCGAC
CCGGCGTTCG CACCAGGCAC CGGCACACCC GAACCCGGCG GCATGACGAC GAACCAGGTG
CTGTCGCTGC TGGAGGAACT GGCTGATCTC GATTTCGTCG GCATGGATTG CGTGGAGGTC
GCTCCACCCT ACGACCACGC CGAACTCACG AGCTACGCTG CGGCAAGTTT CGTGTGGACC
TACCTGTGCG GTCAGCTGGC GCGCCGCGGC GCCACACGGC CGGCCTGA
|
|---|
| Protein sequence | MMAAMTSFAF LSGSSFLKLP SQADRPYAIA GLAWDGAVTN RPGARFGPRA IREASHMLCD
GIHPHFNIDP APYLTDLGDL PLPNTSLEAM RVAMAPSVNA MIRAHHMAWI GGDHSVTLPL
LRAYKSWLGR PLAVIHFDAH CDTWEDHFGE PSGHGTWVYE ALQEGLVLPE CFTQIGIRSA
GAREARDYVR TRGGQIFDAR QLRGLESPAQ LAPVTTAIRK RLAAHGNPPL YLSLDIDCLD
PAFAPGTGTP EPGGMTTNQV LSLLEELADL DFVGMDCVEV APPYDHAELT SYAAASFVWT
YLCGQLARRG ATRPA
|
|---|
| |