Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1888 |
Symbol | |
ID | 4786768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 2021533 |
End bp | 2023440 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640090458 |
Product | Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase |
Protein accession | YP_001021081 |
Protein GI | 124267077 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0150098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGTGA TCACGCTTCC CGACGGCTCG CAACGCGAGT TCCCCGGCCC GGTCACCGTG GCCGAGGTCG CGGCATCGAT CGGCACCGGG CTCGCGAAGG CGGCGCTGGG CGGCCGTGTC GACGGCAAGC TGGTCGACAC GGGCCATCGC ATCGAGGGCG ATGCACGGCT CGCCATCGTC ACCGACAAGG ATGCCGACGG CCTCGACCTG ATCCGCCACT CGACGGCCCA CCTGCTGGCG TACGCAGTGA AGGAACTGTT CCCCGAAGCG CAGGTGACGA TCGGACCGGT CATCGAGAAC GGCTTCTACT ACGACTTCTC GTACAAGCGC CCGTTCACGC CGGAGGATCT GGCGGCCATC GAGGCCAAGA TGACGGAACT GGCGAAGAAG GACGAGAAGG TCGAGCGCCG CGTGCTGCCG CGCGACGAGG CCGTGGCGTA CTTCAAGTCG ATCGGCGAGG ACTACAAGGC CGAGATCATC GCCGGCATTC CGGCCGGCCA GGATGTGTCG CTGTACCGTG AAGGGCGGTT CGAGGACCTG TGCCGCGGCC CGCACGTGCC GAGCACGGGC AAGCTCAGGC ACTTCAAGCT GATGAAGGTG GCCGGCGCCT ACTGGCGCGG CGACCACCGC AACGAGATGC TGCAGCGCAT CTACGGCACG GCCTGGGCCA GCAAGGACGA ACTGCAGCAG TATCTGCACA TGCTGGAGGA GGCCGAGAAG CGCGATCACC GCAAGCTCGG CCGCGAACTC GACCTGTTCC ACCTCGACGA GCACGCGCCG GGCCTCGTGT TCTGGCACCC GAAGGGCTGG ACGGTTTGGC AGCAGGTCGA GCAGTACATG CGCGCGGTCT ACCGCGACAA CGGCTATCTC GAGGTCAAGG GGCCGCAGAT TCTCGACCAG GGTCTGTGGG AGAAGACCGG ACACTGGGAC AAGTACAGGG AGAACATGTT CGTCACGGAG TCGGAGAAGC GTGATTACGC GCTCAAGCCG ATGAACTGCC CGGGCCACAT CCTCATCTAC AAGCAGGGCA TCAAGAGCTA TCGCGACCTG CCGCTGCGTT ATGGCGAGTT CGGGCAGTGC CACCGCAACG AACCCACCGG CGGCCTGCAC GGCATCATGC GGGTGCGCGG CTTCACGCAG GACGACGGAC ACATCTTCTG CACCGAGGAG CACATCCTGC CGGAGTGCGT GGCCTACACG GCCTTGCTGC AGAAGGTCTA CAAGGACTTC GGCTTCAACG ACATCATCTA CAAGGTCGCC ACCCGGCCCG AGAAGCGGAT CGGCTCCGAT GCGGTCTGGG ACAAGGCCGA GCACGCGCTG ATGGAGAGCC TGCGGGCGTC GGGCTGCGAA TTCGTCGTGT CGCCGGGTGA TGGCGCGTTC TACGGCCCGA AGATCGAGTA CACGCTGAAG GACGCCCTGG GTCGCCAGTG GCAGTGCGGC ACGATGCAGG TCGATTTCTC GCTGCCGGAG CGCCTGGATG CGGTCTACGT GGCCGAAAGC GGAGAGCGCT TGTTCCCGGT GATGCTGCAC CGGGCGATCG TCGGCAGCCT CGAGCGCTTC ATCGGCATCC TCATCGAACA GCATGCCGGC GCGCTACCGG CGTGGCTCGC CCCGGTGCAG GTGATGGTGC TCAACATCAC CGACGGGCAG GCCGACTACG CCGCAGAGAT TGCGAAAACG CTGCAAAAAC AAGGAGTTAG AGCCGGCGTC GATTTGCGCA ACGAGAAAAT CACGTATAAA ATCCGAGAGC ATTCCATGCA AAAGCTTCCG TACATCCTTG TCGTTGGCGA CAAGGAAAAG GCTGCGGGGG CCGTTGCGGT GCGCGCCCGG GGTAACCAAG ACCTCGGCGT GATGCCTCTA GATGCCTTTT CCCAGAGGAT GGCTAGCGAC ATCGCCCACA AGGTGTGA
|
Protein sequence | MIVITLPDGS QREFPGPVTV AEVAASIGTG LAKAALGGRV DGKLVDTGHR IEGDARLAIV TDKDADGLDL IRHSTAHLLA YAVKELFPEA QVTIGPVIEN GFYYDFSYKR PFTPEDLAAI EAKMTELAKK DEKVERRVLP RDEAVAYFKS IGEDYKAEII AGIPAGQDVS LYREGRFEDL CRGPHVPSTG KLRHFKLMKV AGAYWRGDHR NEMLQRIYGT AWASKDELQQ YLHMLEEAEK RDHRKLGREL DLFHLDEHAP GLVFWHPKGW TVWQQVEQYM RAVYRDNGYL EVKGPQILDQ GLWEKTGHWD KYRENMFVTE SEKRDYALKP MNCPGHILIY KQGIKSYRDL PLRYGEFGQC HRNEPTGGLH GIMRVRGFTQ DDGHIFCTEE HILPECVAYT ALLQKVYKDF GFNDIIYKVA TRPEKRIGSD AVWDKAEHAL MESLRASGCE FVVSPGDGAF YGPKIEYTLK DALGRQWQCG TMQVDFSLPE RLDAVYVAES GERLFPVMLH RAIVGSLERF IGILIEQHAG ALPAWLAPVQ VMVLNITDGQ ADYAAEIAKT LQKQGVRAGV DLRNEKITYK IREHSMQKLP YILVVGDKEK AAGAVAVRAR GNQDLGVMPL DAFSQRMASD IAHKV
|
| |