| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1884 |
|---|
| Symbol | |
|---|
| ID | 4786764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 2019017 |
|---|
| End bp | 2020054 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640090454 |
|---|
| Product | phenylalanyl-tRNA synthetase, alpha subunit |
|---|
| Protein accession | YP_001021077 |
|---|
| Protein GI | 124267073 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0016] Phenylalanyl-tRNA synthetase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0276208 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCCT TCAGTCAACT GGTGCAACAG GCGGCTCAGG CCTTCGAGAA GGCCCGTACC
CCGGCCGAGC TCGAGGATGC GAAGGCTGCG TTCCTCGGCA AGAGCGGTGA ACTCACGGCG
CGAATGAAGC AGCTGGCGAG CCTGCCGGTC GACGAGAAGA AGGCGCGCGG CGCCGAGATC
AACGCGGCCA AGCAGCAGGT CGAAGCGGCG TTGACGGCGC GCCGCCAGGC CATGGCCGAT
GCCGAACTGG CGCAGCAGCT GCGCGCCGAG TCGCTCGATG TGACTCTGCC GGGCCGGCGC
CGCGGCAGCG GCGGCCTGCA TCCGATCACT CGCGCGATGG AGCGCATCGA GGCGATCTTC
GGCTCGATGG GCTTCGAGGT GGCCGACGGC CCGGAGATCG AAACCGACTG GTTCAATTTC
ACTGCACTGA ACACGCCAGC CGACCATCCG GCGCGCTCGA TGCACGACAC CTTCTATGTC
GAGGGCGGCC AGGTGCTCCG CACCCACACC AGCCCGATGC AGATCCGCCA CGCGGTACGG
CACGTGAAAG CGCACCGCGC CGCGCTCGAT GCCGGGCTGC CGATGCCGGA GATCCGCGTC
ATCGCTCCGG GGCGCACCTA CCGCGTCGAC AGCGATGCGA CGCACTCGCC GATGTTCCAC
CAGGTCGAGG GGCTGTGGGT GGGGCAGAAC ATCAGCTTCA AGGACCTGAA GTCGGTCTAC
GTGAGCTTCA TCCGAGCCTT CTTCGAGACC AGTGACCTGC AGATCCGCTT CCGGCCCAGC
TACTTTCCGT TCACCGAACC GAGCGCCGAG ATCGACATGA TGTTCGGCAG CGGTCCGCTG
AAGGGCCGCT GGCTCGAGGT GTCGGGGTCC GGACAGGTGC ACCCGCAGGT GATCCGCAAC
ATGGGCCTGG ACCCAGAGCG CTACATCGGC TTCGCCTTCG GCTCGGGCAT CGACCGGCTG
GCGATGCTGC GCTATGGCGT CAGCGACCTT CGGCTGTTCT TCGACGGTGA CCTGCGCTTC
CTGTCGCAGT TCAAGTGA
|
|---|
| Protein sequence | MEAFSQLVQQ AAQAFEKART PAELEDAKAA FLGKSGELTA RMKQLASLPV DEKKARGAEI
NAAKQQVEAA LTARRQAMAD AELAQQLRAE SLDVTLPGRR RGSGGLHPIT RAMERIEAIF
GSMGFEVADG PEIETDWFNF TALNTPADHP ARSMHDTFYV EGGQVLRTHT SPMQIRHAVR
HVKAHRAALD AGLPMPEIRV IAPGRTYRVD SDATHSPMFH QVEGLWVGQN ISFKDLKSVY
VSFIRAFFET SDLQIRFRPS YFPFTEPSAE IDMMFGSGPL KGRWLEVSGS GQVHPQVIRN
MGLDPERYIG FAFGSGIDRL AMLRYGVSDL RLFFDGDLRF LSQFK
|
|---|
| |