Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1873 |
Symbol | |
ID | 4786753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 2000640 |
End bp | 2001347 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640090443 |
Product | hypothetical protein |
Protein accession | YP_001021066 |
Protein GI | 124267062 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.097815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATCC TTCACCATGT GATCGAACTT CCTTCCACGC CCAGCGTTCC GGTGCAAGGC CGCAGCGAGC GCTTCCCGGT GCGCCGCATC TACTGCGTCG GCCGCAACTA CGCCGAGCAC GCCATCGAGA TGGGCCACAC CGGCCGCGAG GCGCCGTTCT TCTTCATGAA GCCGGCCGAC GCGGTGCTGG CGGTGGACGC CGGCACGACC GGCGAGATGC CCTATCCGGG CCTGACGAAG AGCCTGCACC ATGAAGTCGA GCTCGTGGTG GCTCTTGGCA AGGGCGGGCG TGACATCCCG GCCGCAGCCG CCCTCGACCA TGTGTGGGGC TACGCGGTCG GGCTGGACAT GACGCGGCGC GACCTGCAGA ACGACATGAA GAAGGCCGGC CGGCCCTGGG AGATCGGCAA GAGTTTCGAG GCGTCGGCGC CGATCGGGCC GCTGACGCCC GCCGCGCAGG TGCCCGGCAT CCACACGGCG CCGATCGTGC TCGACGTCAA CGGCACGGTA CGCCAGGTCA GCCACATCAA CCGCATGATC TGGAGCGTGG CTGAGATCAT CGAGCACCTG TCGGCCGCAT GGACGCTAGC GCCGGGCGAC CTGATCTACA CCGGGACGCC GGAGGGTGTG GCAGCGGTCG TGCCCGGTGA CCTGCTCGAG GCACGCGTCG AGGGCCTGGA GCCGCTGCGC GTGCACATCA CCGGCTGA
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Protein sequence | MPILHHVIEL PSTPSVPVQG RSERFPVRRI YCVGRNYAEH AIEMGHTGRE APFFFMKPAD AVLAVDAGTT GEMPYPGLTK SLHHEVELVV ALGKGGRDIP AAAALDHVWG YAVGLDMTRR DLQNDMKKAG RPWEIGKSFE ASAPIGPLTP AAQVPGIHTA PIVLDVNGTV RQVSHINRMI WSVAEIIEHL SAAWTLAPGD LIYTGTPEGV AAVVPGDLLE ARVEGLEPLR VHITG
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