Gene Mpe_A1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1871 
Symbol 
ID4786751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1999217 
End bp1999927 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content72% 
IMG OID640090441 
Producthypothetical protein 
Protein accessionYP_001021064 
Protein GI124267060 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.176148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC GCGCCGGCGG CGTGAGCAGG GGCGTGTTCG AGTCGCTCAA TCTCGGCAGT 
GCGGTCGGCG ACGATCCGCT CGCCGTGGCG GAGAACCGGC GTCGCTACGC GGCCGCACTG
GGCGGCACGC CGGTCTTCCT GCGCCAGGTT CACGGCGTGC GTGCGCTGCG TCTGCCGCTG
ACCGAACCCT CGGACTCCGT GCCCGAAGCC GACGCCTGCT GGACCACCGA CCCTGGCGTG
GCCTGCGTGA TCCAGGTCGC CGACTGCCTG CCAGTGCTGT TCGCTGCGCC GGGAGGCCTC
GGCGTCGCTG CCGCTCACGC CGGCTGGCGA GGTCTGTCGG CCGGGGTGCT GGAGACGACC
GTGTCCGCTC TGTGCCAGGC GGCCGGCTGC CCCGCGGCCG AGCTGGAGGC CTGGCTTGGC
CCCTGCATCG GGCCACGTCA GTTCGAGGTG GGGGCTGACG TGCTGGCCGG CTTCGGCGTG
TCGCAGGCAA CGCCCCACGG GCGTTTCAAG TCCCATACGG CGGGGAAGTG GCTAGCCGAT
CTGGCAGGCC TGGCACGCGA CCGACTGGCG GCGCTTGGCC TCGAGCGCAT CGAGGGCGGA
ACCTGGTGCA CTGTCGAGGA AGCCTCACGT TTCTTTTCGT TCCGTCGCGA CCGTCCGCGC
CATGGCAACA GCGGGCGCAT GGCCGCTGCC ATCTGGATCG AGCGGCGTTG A
 
Protein sequence
MSTRAGGVSR GVFESLNLGS AVGDDPLAVA ENRRRYAAAL GGTPVFLRQV HGVRALRLPL 
TEPSDSVPEA DACWTTDPGV ACVIQVADCL PVLFAAPGGL GVAAAHAGWR GLSAGVLETT
VSALCQAAGC PAAELEAWLG PCIGPRQFEV GADVLAGFGV SQATPHGRFK SHTAGKWLAD
LAGLARDRLA ALGLERIEGG TWCTVEEASR FFSFRRDRPR HGNSGRMAAA IWIERR