| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1870 |
|---|
| Symbol | |
|---|
| ID | 4786750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1997210 |
|---|
| End bp | 1998892 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640090440 |
|---|
| Product | putative poly-beta-hydroxybutyrate polymerase transmembrane protein |
|---|
| Protein accession | YP_001021063 |
|---|
| Protein GI | 124267059 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.107676 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAG GCGCAACCGG TTGGGGTGGC GTTGCCCCGG GGATGGACTT CGCCCAATCC
GCGCAGCAGC TGGCCCAGGG CTGGACCGAG GCCCTCAAGG GCATGACGGG CGTGCAGCTT
CCGGCCGACG CATTGCCCGC GCTGCAATCG TCCTACCTGA GCGAAGCGGC CGCACTCTGG
AACCAGGCGA CGCAGGGTGC CGATGGGGCA CCACCGCCCG CCGACCGGCG ATTTGCGGCC
AAGGACTGGA TGTCCAACCC GGCGGCGGCC TTCACGGCGG GCATGTACAT GCTCAACGCC
CGCACCTTGC TGCAGCTCGC CGACCAGGTG CAGGCCGACG AAAAGACCCG GCAGCGCATC
CGCTTCGCGG TCCAGCAGTG GATCGACGCC TCGTCGCCGG CCAATTACCT GGCACTCAAC
CCCGAGGCGC AGCGCAAGGC GATCGAGACC CAGGGCGAAA GCATCACCCA GGGACTGCAG
CACCTGTGGC ACGACGTGCG CCAGGGCCAT CTGTCGCAAA CCGACGAGAG CCTGTTCGAG
GTCGGCCGCA ACGTGGCGAC AACCGAAGGT TCGGTGGTGT TCGAGAACGC GCTGTTCCAG
CTGATCGAGT ACAAGCCGCT GACGGCCAAG GTGCACGAGC GGCCGCTGCT GATCGTGCCG
CCGTGCATCA ACAAGTTCTA CATCATGGAC TTGCAGCCCG AGAACTCGCT GGTGCGCTAT
GCCGTGAGCC AGGGGCATCG CGTGTTCATG CTGAGCTGGG TGAACGCCGA CGAGAGCCTC
GGCGACAAGA CCTGGGACGA CTACATCGAG CACGCGGTGA TCCGCGCGAT CCGCGAGGTG
CAGGCGATCT CGAAGCAGGA ACAGATCAAC ACGCTGGGCT TCTGCATCGG CGGCACGCTG
TTGGCGACTG CACTGGCCGT GCTGGCCGCC CGCGGGGAGC ACCCGTCGGC GAGCCTCACG
ATGCTGACGA GCTTCCTCGA TTTCTCCGAC ACCGGCGTGC TCGACCTGTT CGTCGACGAG
CAGATGGTGT CGATGCGCGA GATGGCGCTC GGCCAGGGCG GTCTGCTCAA GGGCAAGGAA
CTGGCGGCAA CCTTCAGCTT CCTCCGCCCC AACGACCTGG TGTGGAATTA CGTGGTCGGC
AACTACCTGA AGGGCGAGAC GCCGCCGCCT TTCGACCTGC TGTACTGGAA CTCCGACAGC
ACCAATCTGC CGGGGCCGAT GTACTGCTGG TACCTCCGCC ACACCTACCT CGAGAACAAC
CTCATCAAGC CCGGCAAGGT GACGGTGTGC GGCGAGCCGC TCGACCTGCG CAAGGTCAAC
CTGCCGACCT TCATCTACGC CTCGCGCGAG GACCACATCG TGCCGTGGCA GAGCGCCTAC
GCGACCGTCG AGGTGCTGCC GGGCAAGAAG CAGTTCGTGC TGGGCGCCTC CGGCCATATC
GCCGGCGTCA TCAACCCCCC GACGAAGAAC AAGCGCAGCC ACTGGATCAA CAGCCGCCTG
CCCAAGACTG CGGATGCCTG GTTCGAAGGC GCCACCGAGC ATCCCGGCAG CTGGTGGCCC
GCCTGGACCG ACTGGCTCAA GCCGCTGGGC GGCAAGCTGG TGCCGGCGCC GAAGGCGCCC
GGTGACCGCA ACCACAAGAT CATCGAGCCG GCACCCGGCC GTTACGTCAA GGCCAAGGCC
TGA
|
|---|
| Protein sequence | MNKGATGWGG VAPGMDFAQS AQQLAQGWTE ALKGMTGVQL PADALPALQS SYLSEAAALW
NQATQGADGA PPPADRRFAA KDWMSNPAAA FTAGMYMLNA RTLLQLADQV QADEKTRQRI
RFAVQQWIDA SSPANYLALN PEAQRKAIET QGESITQGLQ HLWHDVRQGH LSQTDESLFE
VGRNVATTEG SVVFENALFQ LIEYKPLTAK VHERPLLIVP PCINKFYIMD LQPENSLVRY
AVSQGHRVFM LSWVNADESL GDKTWDDYIE HAVIRAIREV QAISKQEQIN TLGFCIGGTL
LATALAVLAA RGEHPSASLT MLTSFLDFSD TGVLDLFVDE QMVSMREMAL GQGGLLKGKE
LAATFSFLRP NDLVWNYVVG NYLKGETPPP FDLLYWNSDS TNLPGPMYCW YLRHTYLENN
LIKPGKVTVC GEPLDLRKVN LPTFIYASRE DHIVPWQSAY ATVEVLPGKK QFVLGASGHI
AGVINPPTKN KRSHWINSRL PKTADAWFEG ATEHPGSWWP AWTDWLKPLG GKLVPAPKAP
GDRNHKIIEP APGRYVKAKA
|
|---|
| |