| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1812 |
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| Symbol | |
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| ID | 4786811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1952323 |
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| End bp | 1954356 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640090383 |
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| Product | DNA ligase (NAD+) |
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| Protein accession | YP_001021006 |
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| Protein GI | 124267002 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACC GCGCGGAAGA TCCGGCCGCC CGCGCCGCGC AACTGCGCGA GCAGCTCGAG
TACCACGCCC ACCGCTACTA CGTGCTCGAC GCGCCGGAGA TCCCGGACGC CGAGTACGAC
CGCCTGTTCA CCGAACTGCA GGCGCTGGAG GCGGCGCACC CCGGGTTGCG GACGCCGGAC
TCGCCGACCC AGCGCGTCAT CGGCGCGGTG CTCGAAGGCC TGTCGGCGGT GCGGCACGCG
GTGCCGATGC TGTCGATCAA GACCGAGACC GACACCACGC CCACCGGTGC GCTGAAGTTC
GACGCCGCGG TGCGCAACGC ACTGAAGCTG CCGCCCGACG CGCCGCCGCT GCGTTACGCC
GCCGAGCTGA AATTCGACGG CTTGGCGATC AACCTGCGCT ACCAGGCCGG CCGGCTGGTA
CAGGCCGCCA CGCGCGGCGA CGGCGAGACC GGCGAGGACG TGACGCACAC CGTCGGCACG
ATCGAGTCGG TGCCGAAGCA GCTGCGCGGC ATCACGGCGC CGGTGCTAGA GGTGCGCGGC
GAGGTCTTCA TGCGGCGAGA CGACTTCGAG GCGCTCAACG AGCGCCAGCG CGAGGCCGGG
CTCAAGACCT TCGTGAACCC GCGCAATGCG GCGGCCGGCA TCGTGCGCCA GCTCGACGCC
AGCATCGCAC GCCAGCGGCC GCTGAGCTTC TTCGCTTATG GACTGGGCGA CGTGCAGGGC
TGGGACGTGC CGCCCACGCA CGCCGGGTTG CTGGACGCGC TGGCGGCGCT GGGGCTGCCG
GTCGACGCGC ACCGCACCGT GGTCGAGGGC GGCGAGGCGC TGGCCGCCTT CCACGCCGGC
ATCGCGGCTG AGCGCGACGC GCTGCCGTTC GACATCGACG GTGTGGTCTA CAAGGTCGAC
GAGCGTGCGC TGCAGCAGCA GCTCGGCTTC AAATCGCGCG AGCCGCGCTG GGCGGTGGCG
CACAAGTACC CGGCGCAGGA GCAGTCGACC CAGCTGGCCG GCATCGAGAT CCAGGTCGGC
CGCACCGGCA AGCTCACGCC GGTGGCCAAG CTGCAGCCGG TGTTCGTGGG CGGCACGACG
GTGAGCAATG CCACGCTGCA CAACCGCTTC GAGCTGCGCC GCAAGGGCAT CCGCATCGGC
GACACGGTGA TCGTGCGGCG CGCGGGCGAC GTGATCCCCG AGGTGGTGGG TCGCGTGCCC
GTCCCGCGAA CGGCGTACAT CCCCAACTTC CGCATGCCGC GCGCCTGCCC GGTGTGCGGC
AGCCAGGCGC TGCGCGAGCG CGGCAGCGTC GACTACCGCT GCTCGGGCGG CCTGTTCTGC
GCTGCACAGC GCAAGCAGGC GCTGCTGCAT TTCGCCGGGC GGCGCATGAT GGACATTGAG
GGACTGGGCG ACAAGCTGGT CGAGCAGCTT GTCGACGGCG GCATCATCCG CACGCTGCCG
GAGCTCTACA GGCTCGGCGT GGCCAAGCTC GTCGCGCTGG AGCGCATGGG CGACAAGAGC
GCGGCCAACC TGGTGGCAGC GCTGGAGGCG AGCAAGGCCA CGACGCTGGC GCGCTTCCTG
TTCTCGCTGG GCATCCGCCA CATCGGCGAG GCGACCGCCA AGGACCTGGC GCGACATTTC
GGCGCGCTCG ACCGCGTGAT GGACGCGAGC GTCGAGCAAC TGCTGGAGGT CAACGACGTG
GGCCCGGTGG TGGCGCAGAG CCTGCGTACC TTCTTCGATC AGCCGCACAA CCGCGAGGTG
GTCGAGCAGT TGCGCGCCGC CGGCGTGCAC TGGGACGAGC ACTCCGGCGA GGCCGACCTC
ACGCCCAGGC CTCTGGCCGG CAAGACCTTC GTGTTGACCG GCACGCTGCC GAGCCTGGGG
CGCGAGGCCG CCAAGGAGCT GATCGAGGCC GCCGGCGGCA AGGTGGCCGG CTCGGTGTCG
AAGAAGACCG ACTACGTGGT GGCCGGCGAG GAAGCCGGCA GCAAGCTCGA GAAGGCTCAG
GCACTGGGTG TGGCCGTGAT CGACGAGGCA GCGCTGCGCG CGCTGCTGGA CTGA
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| Protein sequence | MSDRAEDPAA RAAQLREQLE YHAHRYYVLD APEIPDAEYD RLFTELQALE AAHPGLRTPD
SPTQRVIGAV LEGLSAVRHA VPMLSIKTET DTTPTGALKF DAAVRNALKL PPDAPPLRYA
AELKFDGLAI NLRYQAGRLV QAATRGDGET GEDVTHTVGT IESVPKQLRG ITAPVLEVRG
EVFMRRDDFE ALNERQREAG LKTFVNPRNA AAGIVRQLDA SIARQRPLSF FAYGLGDVQG
WDVPPTHAGL LDALAALGLP VDAHRTVVEG GEALAAFHAG IAAERDALPF DIDGVVYKVD
ERALQQQLGF KSREPRWAVA HKYPAQEQST QLAGIEIQVG RTGKLTPVAK LQPVFVGGTT
VSNATLHNRF ELRRKGIRIG DTVIVRRAGD VIPEVVGRVP VPRTAYIPNF RMPRACPVCG
SQALRERGSV DYRCSGGLFC AAQRKQALLH FAGRRMMDIE GLGDKLVEQL VDGGIIRTLP
ELYRLGVAKL VALERMGDKS AANLVAALEA SKATTLARFL FSLGIRHIGE ATAKDLARHF
GALDRVMDAS VEQLLEVNDV GPVVAQSLRT FFDQPHNREV VEQLRAAGVH WDEHSGEADL
TPRPLAGKTF VLTGTLPSLG REAAKELIEA AGGKVAGSVS KKTDYVVAGE EAGSKLEKAQ
ALGVAVIDEA ALRALLD
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