| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1806 |
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| Symbol | dapD |
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| ID | 4786805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1944279 |
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| End bp | 1945106 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640090377 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001021000 |
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| Protein GI | 124266996 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.712892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCATA CCCAACTGCA ATCGACCATC GACGCCGCGT GGGAATCCCG CGCCACCATC
ACCGCGGCCA ACGCGCCCGA AGTGCGCGAG GCGGTCGAGC AGGTCATCTC CGACCTGAAC
AAGGGCCGCC TGCGCGTGGC CGAGCGCCAG GGCGTCGGCC AGTGGCAGGT GAACCAGTGG
GTCAAGAAGG CGGTGCTGCT GAGCTTCCGA CTGACCGACA ACAAGATCAT GCGGGCCGGC
GACCTGGGCT TCTTCGACAA GGTCGACACC AAGTTCGCCC ACCTCGACGA GGCCGCGATG
CGGGCCACCG GCGTGCGCGT GGTGCCGCCG GCAGTGGCCC GGCGCGGCAG CTACATCGCC
AAGGGCGCGG TGCTGATGCC CAGCTACGTG AACATCGGCG CCTACGTCGA CGAGAACACC
ATGGTCGACA CGTGGGCGAC GGTGGGCTCC TGCGCGCAGA TCGGCAAGAA CGTGCACCTG
TCGGGCGGCG TGGGCATCGG CGGCGTGCTG GAGCCGCTGC AGGCCAACCC GACCATCATC
GAGGACAACT GCTTCATCGG CGCCCGCTCC GAGGTGGTGG AAGGCGTGAT CGTCGAGGAG
AACTCGGTGA TCAGCATGGG CGTCTACATC GGCCAGAGCA CCAAGATCTA CGACCGCGCC
ACCGGCGAGG TGAGCTACGG CCGCGTGCCG GCGGGTTCGG TCGTGGTTTC CGGTAATTTG
CCCAGCGCGG ACGGCAAGTA CTCGTTGTAC TGTGCGGTGA TCGTCAAGAA GGTCGATGCG
CAGACGCGCG CCAAGACCAG CATCAACGAG TTGCTGCGCG GCGCCTGA
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| Protein sequence | MSHTQLQSTI DAAWESRATI TAANAPEVRE AVEQVISDLN KGRLRVAERQ GVGQWQVNQW
VKKAVLLSFR LTDNKIMRAG DLGFFDKVDT KFAHLDEAAM RATGVRVVPP AVARRGSYIA
KGAVLMPSYV NIGAYVDENT MVDTWATVGS CAQIGKNVHL SGGVGIGGVL EPLQANPTII
EDNCFIGARS EVVEGVIVEE NSVISMGVYI GQSTKIYDRA TGEVSYGRVP AGSVVVSGNL
PSADGKYSLY CAVIVKKVDA QTRAKTSINE LLRGA
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