| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1805 |
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| Symbol | |
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| ID | 4786804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1943048 |
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| End bp | 1944226 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640090376 |
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| Product | hypothetical protein |
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| Protein accession | YP_001020999 |
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| Protein GI | 124266995 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00695665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGAA ACATGGAGCG GGTGCTGCGG CTGATGGCCG AGAAGCGGGC CTCGGATGTC
TACCTCACGG CCAACGCGCC GATCCAGATC AAGATCAACG GCCAGCTGCT GCAGCTGTCC
GACCAGTCGC TCACGCCGGA GCAGCCGCGG CAGCTGCTGG CCGAGCTGCT GACACCCAAG
CAGCTCGAGG AGCTGGAGGA GCTGGGCGAG CTGAACATGG GCGTCGGCCT GCAGGGCGTC
GGCAGCTTCC GGCTCAGCGC CTTCCGGCAG CGCGGCTCCA TCGCCGCGGT GTTCCGCTGC
ATCCCGGTGG AGATCCCGAC GCTCGATTCG CTGAAGCTGC CGGAGATCCT GAACACGCTG
ATCCTCGAGA AGCGCGGCCT GATCCTGCTG GCCGGCGCCA CCGGCACCGG CAAGAGCACG
ACGCTCGCCG CGATGCTGGA GCACCGCAAC CGCAACCTCG CCGGCCACAT CCTCACCATC
GAGGACCCGA TCGAGTTCCT GTTCACCAAC AAGAAGGCGA TCGTCAACCA GCGCGAGGTG
GGTCGCGACA CGCAGTCGCT GCAGATCGGT CTGAAGAACG CGCTGCGCCA GGCGCCCGAC
TGCATCCTGA TCGGCGAGAT CCGCGACCGC GAGACCATGA CCGCGGCGAT TTCCTATGCG
CTGTCGGGGC ACCTGGTGGT CTCGACGCTG CACGCCAACA ACAGCTACCA CGCGCTGGGC
CGCATCCTGA GCTTCTACAC GCCCGAGGCG CGCCCGGCCC TGCTGGGCGA CCTGTCCTCC
GCACTCAAGG CCGTGGTGTC GCAGCGCCTG GTGCGCTCGA CCCAGGGCGG GCGGGTGCCG
GCCGTCGAGG TGCTGCTCAA CACCAAGCTG GTGGCCGACC TGATGGCGCA GGGCGATTTC
CCGGGCGTCA AGGAGGCGAT GGAGCAGTCG CTGGCCGAGG GCTCGCAGAC CTTCGAGCAG
GAGCTCGCCC GCCTGATCAA CGACGGCGTG ATCACCCGCG ACGAGGGTCT GAGCTATGCC
GATTCGCCCA CCAACCTGAT GTGGCGGCTG CAGAACGACA GTCCCACGCA GTCGAAGCTG
GTGCCGAAGA AGGAAGAGAA GGACGAGGGC CCGTCCTTCA CCGACATCAC GCTCGACGTG
CGGCAGGACG ATCGCCGCAC GAACTTCGGC GCGCTGTGA
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| Protein sequence | MSGNMERVLR LMAEKRASDV YLTANAPIQI KINGQLLQLS DQSLTPEQPR QLLAELLTPK
QLEELEELGE LNMGVGLQGV GSFRLSAFRQ RGSIAAVFRC IPVEIPTLDS LKLPEILNTL
ILEKRGLILL AGATGTGKST TLAAMLEHRN RNLAGHILTI EDPIEFLFTN KKAIVNQREV
GRDTQSLQIG LKNALRQAPD CILIGEIRDR ETMTAAISYA LSGHLVVSTL HANNSYHALG
RILSFYTPEA RPALLGDLSS ALKAVVSQRL VRSTQGGRVP AVEVLLNTKL VADLMAQGDF
PGVKEAMEQS LAEGSQTFEQ ELARLINDGV ITRDEGLSYA DSPTNLMWRL QNDSPTQSKL
VPKKEEKDEG PSFTDITLDV RQDDRRTNFG AL
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