| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1792 |
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| Symbol | |
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| ID | 4784459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1927268 |
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| End bp | 1929649 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640090363 |
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| Product | putative transcription accessory protein |
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| Protein accession | YP_001020986 |
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| Protein GI | 124266982 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.781108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.584186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACAAGA TCCTGCTGCA AATCGCCGCC GAGCTGAAGG TTCGGCCGGC CCAAGTCAAC
GCTGCCGTCG AACTGCTCGA CGGCGGGGCC ACGGTGCCCT TCATCGCGCG CTACCGCAAG
GAGGCGACCG ACAACCTCGA TGACACCCAG CTGCGCGACC TGGAAGCGCG CCTGGGGTAC
CTGCGCGAGC TCGAGGAGCG CCGCGCCGCC GTGCTGAAGA GCATCGACGA GCAGGGCAAG
CTCACGCCCG AACTGCGCGC CGCGATCGAC GCCGCGCCGA CCAAGCAGGA GCTGGAAGAC
CTCTACCTGC CCTTCAAGCC GCGGCGTCGC ACCAAGGGCA TGATCGCCCG CGAGGCCGGC
ATCGAGCCGC TGGCCGACCG CCTGTTCGCC GACCCCACGC TCGACCCGCT GGTCGAGGCC
GCCGCCTTCG TGGCCGGCTA TGCGGGCGGC GCCGAGGCGC TGGCGACCGC CGGCTTCGCC
GATGTCCACG CGGTGCTCGA CGGCGTGCGC GACCTGCTGT CCGAACGCTG GGCCGAGGAC
GCCGCACTGG TGCAGTCGCT GCGAGGCTGG CTGTGGGACG AGGGGCTGCT GCGCTCCAAG
CTGATGGATG GCAAGAACGA GCAGGACGCG GAGATCGCGA AGTTCCGCGA CTACTTCGAC
TACGACGAGC CCATCCGCAC CGTGCCCTCG CACCGTGCGC TCGCGGTGTT CCGAGGTCGC
ACGCTGGAGA TCCTGGACGC GAAGCTGGTG CTCGACGAGG AGGCGCTGCC GGGCAAGCCG
ACGCTCGCCG AAGGGCGCAT CGCGGTGCAT CTGGGCTGGA GCCACGCCAA GCGCCCGGCC
GACGAGCTGA TCCGCAAGTG CGTGGCCTGG ACCTGGAAGG TCAAGCTCAG CCTGAGCCTG
GAGCGCGACC TGTTCGCGCG GCTGCGCGAG GATGCCGAGA AGGTGGCGAT CAAGGTCTTC
GCCGAGAACC TGCGCGACCT GCTGCTGGCC GCGCCGGCCG GCAAGCGCGT GGTGATGGGC
CTGGACCCCG GCATCCGCAC CGGCGTGAAG GTGGCGGTCG TCAGCGACAC CGGCAAGGTG
CTCGACACGG CCACGGTGTA CCCGCACGAG CCCCGCAAGG ACTGGGACGG CGCGATCCAC
ACGCTGGGCC GGCTGGCCGC GACCCACGGC GTCAACCTGA TCGCCATCGG CAACGGCACC
GCGAGCCGCG AGACCGACAA GCTGGCGGCC GACCTGATCA AGCGCATCCA GCAACTGGCC
CCTGGCACGC ACATCGAGAA GGTGGTCGTC AGCGAGGCGG GCGCTTCGGT CTACTCGGCC
TCGGAGTTCG CCAGCAAGGA ACTGCCGGAG CTCGACGTGA GCCTGCGCGG AGCGGTCTCG
ATCGCACGGC GGCTGCAGGA CCCGCTGGCC GAGCTGGTGA AGATCGACCC CAAGAGCATC
GGCGTCGGCC AGTACCAGCA CGACGTGAAC CAGAGCGAAC TCGCGCGCAC GCTCGACACG
GTAGTGGAGG ACTGCGTCAA CTCGGTCGGC GTCGATCTGA ACACCGCGTC GGCGCCGCTG
CTGTCGCGCG TATCCGGGCT GTCGGGCGCG GTCGCGGCCG GCATCGTGCG TTGGCGCGAT
ACGCACGGCG CCTTCCGCAA CCGCCGCCAG CTGCGCGAGG TCGCGGGCCT GGGTGAGAAG
ACCTTCGAGC AGGCGGCCGG CTTCCTGCGC ATCCGCGACG GCGACAACCC GCTCGACCTG
TCGGGCGTGC ACCCCGAGAC CTACCCGGTG GTCGAGAAGA TCATCGCCGC CGTCGGCCGA
CCCGTCGGTG ATCTGATCGG CAACAGCGAC GTGATCCGCA AGCTGCGGCC CGAGGCTTAC
GCCGACGAGC GCTTCGGCGC GATCACCGTG AAGGACATCC TCGCCGAGCT GGAGAAGCCT
GGCCGCGACC CACGCCCGGA CTTCAAGGTG GCGCGCTTCA ACGAGGGCGT CGACGACATC
AAGGACCTGC AGGCCGGCAT GACGCTGGAA GGCACGGTCA GCAACGTGGC GCAGTTCGGC
GCCTTCGTGG ACCTGGGCGT CCACCAGGAC GGGCTGGTAC ACGTGAGCCA GCTGGCGAAC
AAGTTCGTCA ACGACGCGCG CGAGATCGTG AAGACCGGCG ACATCGTCAA GGTCAAGGTG
CTCGAGGTCG ATCTGGCGCG CGGCCGCATC TCGCTGACGA TGAAACTCGA CACCAGCGTG
GCGCGCGGAC GCGACGGACG CGGCGAGGGC AGCGAGAACG GCTACCGGCC GGCCGGACGC
GATGAGCGTG CCCGCAGCGG TGCGCCGCGC GGCAGCTCAC CCCAGTCCGC CGCCGGCGGC
GCGATGGCCG CCGCGTTCGC GAAGCTGCAG TCGCGGCGCT GA
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| Protein sequence | MDKILLQIAA ELKVRPAQVN AAVELLDGGA TVPFIARYRK EATDNLDDTQ LRDLEARLGY
LRELEERRAA VLKSIDEQGK LTPELRAAID AAPTKQELED LYLPFKPRRR TKGMIAREAG
IEPLADRLFA DPTLDPLVEA AAFVAGYAGG AEALATAGFA DVHAVLDGVR DLLSERWAED
AALVQSLRGW LWDEGLLRSK LMDGKNEQDA EIAKFRDYFD YDEPIRTVPS HRALAVFRGR
TLEILDAKLV LDEEALPGKP TLAEGRIAVH LGWSHAKRPA DELIRKCVAW TWKVKLSLSL
ERDLFARLRE DAEKVAIKVF AENLRDLLLA APAGKRVVMG LDPGIRTGVK VAVVSDTGKV
LDTATVYPHE PRKDWDGAIH TLGRLAATHG VNLIAIGNGT ASRETDKLAA DLIKRIQQLA
PGTHIEKVVV SEAGASVYSA SEFASKELPE LDVSLRGAVS IARRLQDPLA ELVKIDPKSI
GVGQYQHDVN QSELARTLDT VVEDCVNSVG VDLNTASAPL LSRVSGLSGA VAAGIVRWRD
THGAFRNRRQ LREVAGLGEK TFEQAAGFLR IRDGDNPLDL SGVHPETYPV VEKIIAAVGR
PVGDLIGNSD VIRKLRPEAY ADERFGAITV KDILAELEKP GRDPRPDFKV ARFNEGVDDI
KDLQAGMTLE GTVSNVAQFG AFVDLGVHQD GLVHVSQLAN KFVNDAREIV KTGDIVKVKV
LEVDLARGRI SLTMKLDTSV ARGRDGRGEG SENGYRPAGR DERARSGAPR GSSPQSAAGG
AMAAAFAKLQ SRR
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