Gene Mpe_A1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1780 
Symbol 
ID4784447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1916189 
End bp1916719 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content70% 
IMG OID640090351 
Producthypothetical protein 
Protein accessionYP_001020974 
Protein GI124266970 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.371406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCGAG CAACGCCGCG TTCTTTGAGT GGCTCGAGCG CTGAGGCGGC GCGTTCACGG 
CACGGACCCG ACACGATGGA CTTCCCGGTA CTCATTCCCT TCGTGGAGCA GCTCGGCTTC
GAACTGGTCC GTCTTTCCGA CGGCGAGGCC GAGATCACGG TGCGCGTCGT GGACGCGCTG
ACCAATTCCT TCCAGGTCGC CCACGGCGGT CTGACGATGA CCCTGCTCGA CGTCGCGATG
GCGCATGCCG CGCGCAGCAG CAACTTCGCG CAGGCCGGGC TCGGCCCCGG CGTCGTGACC
GTGGAGATGA AGACCAGCTT CCTGCGTCCC GGCGAGGGCC TGCTGCGTTG CCACGGCCGG
CTGCTGCACC GCACGGCCAC GCTGGCGTTC TGCGAAGGCC GCGTGCTCGG CGAGGACGGC
GTGCTGTGCG CACATGCGAC AGGCACCTTC AAGTACCTGC GCGCGCTGCC GGCCGGCGCG
CGTGAGCCCA AGTCGCTGCA GCGCCGTCTC GCCGGCAGCG GCTCCGACTG A
 
Protein sequence
MRRATPRSLS GSSAEAARSR HGPDTMDFPV LIPFVEQLGF ELVRLSDGEA EITVRVVDAL 
TNSFQVAHGG LTMTLLDVAM AHAARSSNFA QAGLGPGVVT VEMKTSFLRP GEGLLRCHGR
LLHRTATLAF CEGRVLGEDG VLCAHATGTF KYLRALPAGA REPKSLQRRL AGSGSD