| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1715 |
|---|
| Symbol | |
|---|
| ID | 4785268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1842124 |
|---|
| End bp | 1842657 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640090286 |
|---|
| Product | uncharacterized ABC-type transport system permease component-like protein |
|---|
| Protein accession | YP_001020910 |
|---|
| Protein GI | 124266906 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.128663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACCC TGGCGCAAGC CCACGGGCCT GCCGCGCACG GCACCTGGCT GCTGCTGATG
GCAGTCCCGT GTCTCCTTCC CGTGCCTGGC GTCGGCACTG TGCTTGGCCT GGGAATGGCC
GCGCTGGCGG CGGCGATGTG GCGGGGTCAG TCCTCTGCAT GCCTTCCTCG GCGGGTGGCT
GAACTCGAAC TCTCACGCAC CTGGGCGCAG CGGGTGCTGG GCATGCTTGC GTCTGCCTAT
TGCGTGGCTG GGCGTCTTGC CAGGGCCCGG CTGAGCCATC TTGCATCCCC GGAGAGACGG
TCATGGACCG CCGCAGCGAT TGGGTTGATG GCTTTCATCG TCGTCATGCC CATCCCCTTC
GGCAACGTGC TCCCGGCGCT GGCGCTGATG CTCATCGGAC TGGGGCTGGT GTTTCGCGAT
GGTGTTGCGG TTGTCCTGGG GCTGGCGATG GCGGCCCTGG CGATGTGCGT CACTGCGGGC
GTCATGCTGA TGGCATGGGC CTGGGGCAGT GACTGGCTCC TGGGTTTGTT TTGA
|
|---|
| Protein sequence | MQTLAQAHGP AAHGTWLLLM AVPCLLPVPG VGTVLGLGMA ALAAAMWRGQ SSACLPRRVA
ELELSRTWAQ RVLGMLASAY CVAGRLARAR LSHLASPERR SWTAAAIGLM AFIVVMPIPF
GNVLPALALM LIGLGLVFRD GVAVVLGLAM AALAMCVTAG VMLMAWAWGS DWLLGLF
|
|---|
| |