| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1711 |
|---|
| Symbol | |
|---|
| ID | 4785501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1837784 |
|---|
| End bp | 1839094 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640090282 |
|---|
| Product | nitrate/proton symporter |
|---|
| Protein accession | YP_001020906 |
|---|
| Protein GI | 124266902 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.20518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.395808 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCG TCACCACCTC ACCCTCGCCC AACGTCCCCT CGCGGAGCAG CAGCGCCACC
ACCTCTTCCA AGGCCTGGAG CGTGCTCATC GTCAGCACCC TGGCCTTCAC CGTGTGCTTC
ATGGTGTGGA TGATGTTTGG CGTCATCGGC ATCCCACTGA AGAAGCAGCT GGGCCTGAAC
GCCACTGAGT TCGGCCTGCT CACGGCCACG CCGGTGCTCA CGGGCTCGCT GATCCGCGTG
CCGCTGGGCA TCTGGACCGA CCGCTACGGC GGCCGCATCG TGATGACGGT GCTGATGGCC
ATCACCGTGC CGCCGATCTT CCTGATGTCC TACGCCACGG CGTACTGGCA CTTCCTGGTG
ATCGGCCTGT TTGTCGGCCT GGCCGGCGGC TCCTTCAGCG TCGGCACCCC CTACGTCGCG
CGCTGGTTCC CGAAGGAAAA GAAGGGCATG GCGATGGGCG TGTACGGCGC TGGCAACTCG
GGCAGCGCCG TCAACAAGTT CGTCGCTCCG GCCATCATCG CTGCGCTGGG CTGGGCGGCC
GTGCCGCAGG TGTACGCCGC GATCATGGCC CTCACCGTCG TCGTGTTCTG GTTCTTCAGC
CACCACGACC CCAAGCACGT GGTGCCCAGT GACACCAAGC TGTCGGACCA GCTCAAGCTG
CTCAAGGACC CCGCGGTGCT CAAGTACTGC CAGTACTACA GCATCGTCTT CGGTGGCTAC
GTGGCGCTGG CGCTGTGGAT GGTGCAGTAC TACGTCGGCG AGTTCGGCCT GTCCATCACC
ACCGCGGCGC TGCTGGCCGC GTGCTTCAGC CTGCCCGGCG GCGTGCTGCG GGCCGTTGGC
GGCGTGCTGT CCGACAAGTA CGGCGCGCAC AAGGTCACCT GGTGGGTGAT GTGGGTGAGC
TGGATCTGCC TGTTCCTGCT GAGCTACCCG CAGACGCAGT TCACGGTGCT CACCGTCAAC
GGCCCGAAGA CCTTCGAGAT CGGCCTGAAC GTCGTCTGGT TCACCGTGCT GATGGCCGTG
CTGGGCGTGG CCTGGGCCTT CGGCAAGGCC AGCGTCTTCA AGTACCTGGG CGACGAGTAC
CCGAACAACA TCGGCGCGGT CAGCGGCATC GTGGGCCTGG CCGGCGGCCT GGGCGGCTTC
GTCCTGCCCA TCCTCTTCGG CGTGCTGATG GACCTCACCG GCATCCGCTC CAGCGCCTTC
ATGCTGATGT ACGGCGTGGT CTGGGTGAGC CTGATCTGGA TGTACTGGAC CGAGGTGCGC
CGCACCCCGG TGATGGGCCG CGACGCCCCC GTATTCAAGC TCGCGGACTG A
|
|---|
| Protein sequence | MAAVTTSPSP NVPSRSSSAT TSSKAWSVLI VSTLAFTVCF MVWMMFGVIG IPLKKQLGLN
ATEFGLLTAT PVLTGSLIRV PLGIWTDRYG GRIVMTVLMA ITVPPIFLMS YATAYWHFLV
IGLFVGLAGG SFSVGTPYVA RWFPKEKKGM AMGVYGAGNS GSAVNKFVAP AIIAALGWAA
VPQVYAAIMA LTVVVFWFFS HHDPKHVVPS DTKLSDQLKL LKDPAVLKYC QYYSIVFGGY
VALALWMVQY YVGEFGLSIT TAALLAACFS LPGGVLRAVG GVLSDKYGAH KVTWWVMWVS
WICLFLLSYP QTQFTVLTVN GPKTFEIGLN VVWFTVLMAV LGVAWAFGKA SVFKYLGDEY
PNNIGAVSGI VGLAGGLGGF VLPILFGVLM DLTGIRSSAF MLMYGVVWVS LIWMYWTEVR
RTPVMGRDAP VFKLAD
|
|---|
| |