| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1688 |
|---|
| Symbol | |
|---|
| ID | 4785480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1813896 |
|---|
| End bp | 1814492 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640090261 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001020885 |
|---|
| Protein GI | 124266881 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00557645 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.567648 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCACCG TGACGAGCAC CGCCACGTCC GCCATGCCCA CGCCGCTGCT GCACGCCAGC
CCTGCCGTCG GCTTCGAGCA GCCCTTCGAG ATGCTCGAGG CCTGCCACGA GCGCGTGAAG
CGCAGCCTCG ACCTGCTGCA GCGCCTCGGC GCCCACCTCG ATGCGTACGG CGCCGACACA
CAGGCCGCCG CCGCGGCACG CGATGTGCTG CGCTACTTCG ACATCGCCGG GCCGCTGCAC
CACGAGGACG AGGAGCGCCA CGTCCTGCCG CGCCTGCGCG CCAGCGGCCA TGGCGCGCTG
GCCGAACGCC TGCAAGCTGA CCACACGGCG CTCTCGGCCG CCTGGCAAGA ATGGCGCACG
GTGCTAGAAG GTGTATGCGC CGGGCGATGG GACATCCGCG CCGCAGGCCG CGTGCGCGCC
GGCTGGCGCG AGTTCGAAAC CCGCTACGAG GCCCACATCG CGATCGAGGA GGCGGTGGCC
TTCCCCAGCG CCGCGCACGG CCTGCCCGCC GACACGCTGG CCGCCATGGG CCACGAGATG
GCGAGCCGCC GGCGCAGCCC GCCGCAGCCC GCCACCACGC CGGGCACGCC CGCATGA
|
|---|
| Protein sequence | MGTVTSTATS AMPTPLLHAS PAVGFEQPFE MLEACHERVK RSLDLLQRLG AHLDAYGADT
QAAAAARDVL RYFDIAGPLH HEDEERHVLP RLRASGHGAL AERLQADHTA LSAAWQEWRT
VLEGVCAGRW DIRAAGRVRA GWREFETRYE AHIAIEEAVA FPSAAHGLPA DTLAAMGHEM
ASRRRSPPQP ATTPGTPA
|
|---|
| |