Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1681 |
Symbol | virB8 |
ID | 4785473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 1807569 |
End bp | 1808216 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640090254 |
Product | type IV secretory pathway, VirB8 component |
Protein accession | YP_001020878 |
Protein GI | 124266874 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.944292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.516044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAAC GCTCGGAGCG CCGGGCCTGG TGGGTCGCCA TTGCCGGCCT GGTGCTGGGC CTGATCGGCA TCGCCGCGGT GTTCGTCCAG GGCCCGCTGC GCCGCGTGGT GGAGATCCCC ATCGTGGTCG ACCGGGTCAC TGGCGAGGCC ACGGTCCAGC AGCGACTCTC CGTCGAGACC ATCCCCCCGA TGGAGGCGCT GGACAAGCAC AACCTCGCCA CCTTCGTGCG GGCACGCGAG GGCTACAGCT GGATGTTCCT TCAGCGCGAC TTCGACCAGG TTGCGCGCAT GGCGGTGCCG GCGGTCTTCG CCGACTACAA CCGTCAGTTC GAGGGCGACG GCGCGCTGCA GAAGCGGATC GGTGCCGCCG AGGACTGGCG CATCAATGTC GTCGGCGTAC GCCTAGCTGC GTCCGGCCGC CCCGGCAACC AGGGCGAGGC CACGGTCACC TACGACAAGG TAGTGCGCCT GACGGACCGC AACCTGCCCG AGGTCACCAC GCGCCACGTG GCCAGCGTCG TCTACCAGTA CCAGCCCAAG GTCCTGGCCA AGGAGCGCGA CCGGCTCGAG AACCCGTTCG GCTTCGTCGT AACTGCCTAC CGGTCCGATC CCGAGATCAA CACCGCGGCA CCGGGGGCCA AGCCATGA
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Protein sequence | MLERSERRAW WVAIAGLVLG LIGIAAVFVQ GPLRRVVEIP IVVDRVTGEA TVQQRLSVET IPPMEALDKH NLATFVRARE GYSWMFLQRD FDQVARMAVP AVFADYNRQF EGDGALQKRI GAAEDWRINV VGVRLAASGR PGNQGEATVT YDKVVRLTDR NLPEVTTRHV ASVVYQYQPK VLAKERDRLE NPFGFVVTAY RSDPEINTAA PGAKP
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