Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1670 |
Symbol | |
ID | 4785751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 1793829 |
End bp | 1794572 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640090239 |
Product | hypothetical protein |
Protein accession | YP_001020867 |
Protein GI | 124266863 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00378302 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.544316 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG CAGTCATCAA CTTTTCGGGC AACGTCGGCA AGACCACCGT CTCCCGGCAC CTGCTGTTGC CTCGCATCCA AGGTGCCGAA CTCATCAGCG TGGAGAGCGT GAACGCGGAT GAGGGCAAGA CGACGGCTCT GCGCGGTGGG CAGTTCGCCG AGTTGCAGGA GTACCTGCAG ACGGTGAACA GCGCCATCGT CGACATTGGC GCCAGCAACG TCGATCAGCT GCTGTTCCTG ATGCAGAGCT ACCGCGGCAG CCACGAGGAC TTTGACTGCT TTGTCGTACC GACGGTGCCG CCCCTGAAGC AGCAGCAGGA CACCATCGCG ACGTTGATCG ATCTGTCGCG CCTGGGCGTC CCGCCGTCGC GACTGAAGAT CCTGTTCAAC ATGACAGAGC CTGGCCGGCC CGTCGAGCAG ACCTTCTACC TGTTGCTGGC CTACCTCGCC CAGCACCCGA TCGCCGTTCC CAACACGGCA TGCAGCCTGG GCGCGAATGA GATCTACGGT CGGATCCGGG GGATCAAGTC GGACCTTGGA ACCCTGGCGC GCGACACCAC GGACTACAAG TCGCTGATTG CCAAGGCCAA GGACGCCACC GAGAAGCTGG CCCTGGCCCA GAAACTCGCC ACCCGCCGAC TGGCGTCCGG CGTCGTGCTG GAGCTCGATG CCTGCTTCGG CGCACTGGAC CTCCACGCGC TTTCGGCAGG TGCCTCGCCA ACCGAGACGA GCGCGGAAGC GTGA
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Protein sequence | MKIAVINFSG NVGKTTVSRH LLLPRIQGAE LISVESVNAD EGKTTALRGG QFAELQEYLQ TVNSAIVDIG ASNVDQLLFL MQSYRGSHED FDCFVVPTVP PLKQQQDTIA TLIDLSRLGV PPSRLKILFN MTEPGRPVEQ TFYLLLAYLA QHPIAVPNTA CSLGANEIYG RIRGIKSDLG TLARDTTDYK SLIAKAKDAT EKLALAQKLA TRRLASGVVL ELDACFGALD LHALSAGASP TETSAEA
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