| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1645 |
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| Symbol | copF |
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| ID | 4787271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1773441 |
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| End bp | 1775675 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640090214 |
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| Product | P1 ATPase/HMA domain-containing protein |
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| Protein accession | YP_001020842 |
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| Protein GI | 124266838 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.321264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGC AGACTCACAA GCACGAAGGG CACGGCACGA CCCGACAGCA TGGTCACGTG
CATGGCCACC ATCACCATGG GAGGCTGCAC GAGCCCAGCC CGGCGCCGGA CGCAGCGGGT
GAAGCCCCGC CGGCCGGCAC GATCTACACC TGTCCCATGC ACCCTGAGGT GCGACAGGAC
CACCCTGGCA ACTGCCCCAA GTGCGGCATG ACGCTGGAGC CGGTGCTACC GACACTCGAC
GAGGACGAGA ATCCCGAACT GGCCGACTTC TCCCGACGCT TCTGGTGGAC CCTGCCGCTG
ACGGTGGTCG TCACGCTGCT GGCCATGGTG GGCCATCGCC TGCAGTGGTT CAGCATGGGC
GTGCAGAGTT GGGTGGAACT GGTGCTCTCC GTACCCATCG TCCTGTGGGC GGGCTGGCCC
TTCTTTGTTC GCGGCGTGCA ATCGATCCGC CTGCGCAGCC CGAACATGTG GACGCTGATC
GGGCTGGGTA CCGGGGCGGC GTTCGCCTAC AGCGTGGTGG CGACATTGGC GCCGGATGTC
TTTCCGGACT CGTTCCAGGC CATGGGGCGG GTGGCGGTGT ACTTCGAGGC CGCGGCGGTG
ATCATTTCGC TGACGCTGCT GGGCCAGATG CTCGAACTCA AGGCCCGGTC GCAGACCTCG
GCCGCCATCC AGTCGCTGCT GGGCCTGGCG CCGAAGACCG CGCGTCGCAT TGCCGCCGAT
GGCAGCGAGG ACGACGTGCC GCTGACACAC GTCCACGTCG GCGATCTGCT GCGTGTGCGG
CCCGGCGAGA AGGTGCCGGT GGATGGCGTG GTGACCGAAG GCTCGAGCGC GGTCGATGAG
GCCATGCTGA CCGGCGAACC CCTGCCGGTG AGCAAGCGGG CCGGCGACAA GTTGATCGGC
GCCACGCTGA ATACCAGCGG GACGCTGGTG ATGCGCTCGG AACGTGTCGG TGCACAGACC
ATGCTGTCCC AGATCGTGCA GATGGTGGCG CAGGCCCAGC GCTCGAAGGC GCCGATGCAG
CGCATGGCCG ACCTGGTGGC TGGCTGGTTC GTGATGGCTG TGGTCGCCAT CGCCGTAGTG
ACTTTCTTCG TCTGGGGCAT CGTCGGCCCC GAACCGAGCT GGGTCTACGG GCTGATCAAC
GCGGTCGCCG TGCTGATCAT CGCCTGCCCG TGCGCGCTGG GGCTGGCCAC ACCGATGTCG
ATCATGGTCG CGACCGGGCG CGCCGCGACG CAGGGCATCC TGTTCCGCGA CGCAGCAGCG
ATCGAACACT TGCGCAAGGT CAACACGCTG ATCGTCGACA AGACCGGTAC GCTGACCGAA
GGCAAGCCCA GCTTCGAGCG CGCCATGCCG GCGCCGGGCT TTAGCGCGGA AGAGGTGCTG
CGTCTGGCCG CGAGCCTGGA CCAGGGCAGC GAGCATCCTC TGGCCGACGC CATCGTCCGC
GCGGCTCGCG AGCAGGGTCT GGTGCTCGAC AAAGCGGAGG GGTTCGAGTC GGGTTCGGGC
ATCGGCGTTC GTGGCCTGGT GGGCGGGCGC CAGCTGGCAC TTGGCAACAC TGCCCTGATG
GAGCAACTGG GCATTGACGT GTCGGGCCTG TTGCCGCAAG CCGAGGCGCT GCGCGGCCAG
GGCGCCAGCG TGATGTTCCT CGCCGCAGAT GGCAAGCCAG TTGGCTTGCT GGCCGTCTCT
GACCCCGTCA AGGCGAGCAC ACCGGAGGCG CTCGCCACCT TGCGCGCCAA GGGGCTGCGC
GTGGTAATGG CCACTGGCGA CGGCATCACC ACCGCGCGTG CGGTGGCCAC GCGGCTGGGC
ATCGACGAAG TGCACGGCGA GGTGAAGCCG GCCGACAAAC TGGCGCTGGT GCGGCGGCTG
CAGGCCGATG GCCATGTGGT GGCAATGGCA GGAGACGGCA TCAACGATGC ACCGGCGCTG
GCCCAGGCGG ATGTCGGCAT CGCCATGGGG ACGGGGACCG ATGTCGCCAT GAACAGCGCG
CAGGTCACCC TGGTCAAGGG CGACCTGCGG GGCATCGCTG CCGCCCGGGC CTTGTCGGTG
CAGACCGTTG CCAACATGAA GCAGAACCTT GGTTTTGCCT TCATTTACAA CGCGCTGGGC
GTGCCGCTGG CCGCGGGGCT GCTGTACCCG CTCACAGGCT GGTTGCTGTC GCCGATGATC
GCCGCGCTGG CGATGAGTCT GAGCTCGGCG TCGGTGATCG CAAACGCGCT GCGGCTGCGC
AGGGTGAGGG CGTGA
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| Protein sequence | MDMQTHKHEG HGTTRQHGHV HGHHHHGRLH EPSPAPDAAG EAPPAGTIYT CPMHPEVRQD
HPGNCPKCGM TLEPVLPTLD EDENPELADF SRRFWWTLPL TVVVTLLAMV GHRLQWFSMG
VQSWVELVLS VPIVLWAGWP FFVRGVQSIR LRSPNMWTLI GLGTGAAFAY SVVATLAPDV
FPDSFQAMGR VAVYFEAAAV IISLTLLGQM LELKARSQTS AAIQSLLGLA PKTARRIAAD
GSEDDVPLTH VHVGDLLRVR PGEKVPVDGV VTEGSSAVDE AMLTGEPLPV SKRAGDKLIG
ATLNTSGTLV MRSERVGAQT MLSQIVQMVA QAQRSKAPMQ RMADLVAGWF VMAVVAIAVV
TFFVWGIVGP EPSWVYGLIN AVAVLIIACP CALGLATPMS IMVATGRAAT QGILFRDAAA
IEHLRKVNTL IVDKTGTLTE GKPSFERAMP APGFSAEEVL RLAASLDQGS EHPLADAIVR
AAREQGLVLD KAEGFESGSG IGVRGLVGGR QLALGNTALM EQLGIDVSGL LPQAEALRGQ
GASVMFLAAD GKPVGLLAVS DPVKASTPEA LATLRAKGLR VVMATGDGIT TARAVATRLG
IDEVHGEVKP ADKLALVRRL QADGHVVAMA GDGINDAPAL AQADVGIAMG TGTDVAMNSA
QVTLVKGDLR GIAAARALSV QTVANMKQNL GFAFIYNALG VPLAAGLLYP LTGWLLSPMI
AALAMSLSSA SVIANALRLR RVRA
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