Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1623 |
Symbol | |
ID | 4787247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 1751455 |
End bp | 1752855 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640090191 |
Product | integrase or site-specific recombinase |
Protein accession | YP_001020820 |
Protein GI | 124266816 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.262588 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGTCG TGCGACGCCT GGACGAAGCT GCGCAAGCCA TCCCCTTGCG GGCGCGATCA CTCACGGATC TCCAGCTCAA GGCCCTGAAG CCGCGGGACA AGGCCTACAA GGTCAGCGAC CGGGACGGGC TGTACGCCTA CGTGGCGCCG TCGGGGACCG TCAGCCTGCG GTACGACTAC CGCATCGGCA GGCGCCGCGA GACCCTGACC CTCGGTCGCT ACGACGCCAC CGCTCCGGCG CGGGTGCCTC GGTCCCTGGA CGTGCTCGAG TACGGCATGG GCCTGTCCCT GGCCGAGGCG CGACTGCTGC TGACCAAGGC GAAGCGCGCG CTCGAGCAAG GCGTGTCGCC TTCGCGCGCG AAGGCCGAGC AGAAGGCGGC GGAATCCGAC GCCCTCACGT TCGGCAAGTG GGCCGAGCGC TACTTCGAGT TCAAGGGTGA TCCCAAGAGC AAGGGCGAGC AGCTGGCCGA CAGTACGCTC GCCATGCGTC GCTCAACCTA CAAGCGCGCG CTGGAGAAGC CCCTGGGCAA ACTGATGCTG GAGGAGATCA CACCCAACCG GCTGGCGGCC CTGTGCGACG ACATCAAGGC GCAGCGTGGC CCGGCGGTGG CGGTGCACGC CCGCGAGATC GTCCTGATGG TCTACCGACA CGTCCAGCGC AAGGGGATCG AAGTGCCGAA CCCGGCCGAA CGGGTGCAGG CGAGCGCCAT CGCCCGCTTC GAGCCGCGCG ATCGTGCGCT GTCTCCGAGC GAGCTGCGCC TGTTCCTCGC GGCGCTGGAC CAGTGCGCGA CGATGCCGAC GCTGCGGCTG GCCGTGCGCT TTGTGCTGCT GACCGGCGTT CGCAAGGGCG AGTTCATCGG TGCGACGTGG GACGAGATCG TCTTCGACAC CGAGACCTGG ACGATTCCGT CGCGCCGGAT GAAGGGTGGC AGGGCCCACG TGGTCTATCT CAGCGACCAG GCGATGGACA TCCTGACGAC GCTGCGGTCG TGCTTCTCGG CAAGCCGCTA CCTTCATCCC GGCCGGTATG ACAGCGACCT GCCGATCAGC GACGCGACCC TGAACCGGGT CATCGCGATG GCGATCCGTG GCATTCAGGC GACCGCTCCG GAGTTTCAGC CGTTCACCGT GCACGACCTG AGGCGGACCT TCAGCACCTC GCTGAACCGG GCCAAGTTCG ACGAGCGCTG GATCGAGATG GCGCTGGCGC ACGTGCCCCG GAACCGCATC GCCGCGACGT ACAACGTGGC CCGCTATGCG GCCGAGCGCC GGATCATGAT GCAGGCCTGG GCCGACATGC TCGACCTTTG GGAGAAGGGC GAGTCGGCCA AGGAAGTGAT CTTGAAGGCG AAGCAGGCAG CCTCCGAGGT GACCGACTTC GAGTTGGAAG ACGATCTTTG A
|
Protein sequence | MSVVRRLDEA AQAIPLRARS LTDLQLKALK PRDKAYKVSD RDGLYAYVAP SGTVSLRYDY RIGRRRETLT LGRYDATAPA RVPRSLDVLE YGMGLSLAEA RLLLTKAKRA LEQGVSPSRA KAEQKAAESD ALTFGKWAER YFEFKGDPKS KGEQLADSTL AMRRSTYKRA LEKPLGKLML EEITPNRLAA LCDDIKAQRG PAVAVHAREI VLMVYRHVQR KGIEVPNPAE RVQASAIARF EPRDRALSPS ELRLFLAALD QCATMPTLRL AVRFVLLTGV RKGEFIGATW DEIVFDTETW TIPSRRMKGG RAHVVYLSDQ AMDILTTLRS CFSASRYLHP GRYDSDLPIS DATLNRVIAM AIRGIQATAP EFQPFTVHDL RRTFSTSLNR AKFDERWIEM ALAHVPRNRI AATYNVARYA AERRIMMQAW ADMLDLWEKG ESAKEVILKA KQAASEVTDF ELEDDL
|
| |